Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01276 and RBAM_007800

See DNA alignment / Visit BSNT_01276 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:57
# Commandline: needle
#    -asequence pep-align/BSNT_01276.1.9828.seq
#    -bsequence pep-align/RBAM_007800___yflP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01276-RBAM_007800___yflP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01276-RBAM_007800___yflP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01276
# 2: RBAM_007800___yflP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 320
# Identity:     203/320 (63.4%)
# Similarity:   255/320 (79.7%)
# Gaps:           1/320 ( 0.3%)
# Score: 1096.0
# 
#
#=======================================

BSNT_01276         1 MKKSIILLILLLIFMQGDIRQAAAPRLPDGPIEIVVPAEPSGGWDVTAQA     50
                     ||:..:||::|...:..|.||.|..|..:||:||||||.|.|||||||:|
RBAM_007800__      1 MKRLGVLLVMLAALVSFDGRQMAGIRSAEGPVEIVVPAAPQGGWDVTAKA     50

BSNT_01276        51 IQSVLRQKQIVKGDVHIVYKSGGGGEKGWKYVNKSSKQTISMTSSLILSN    100
                     :|||:.:|||:...|.||||.||||:.||||||:.....|||.|||:|||
RBAM_007800__     51 LQSVIERKQILGRPVKIVYKPGGGGDSGWKYVNERKTDVISMNSSLLLSN    100

BSNT_01276       101 DLLGQSKLKMSDFTPLAILSKEWQTVALPKGSALTNGKDVLNEINMHPGK    150
                     ::||||:||.:|||||||::||||||||||.|.:.:||.:|.:|..|||.
RBAM_007800__    101 EILGQSRLKAADFTPLAIIAKEWQTVALPKDSKIKSGKRLLGDIKAHPGG    150

BSNT_01276       151 VRIGFAPGFGNDDQLSFVRAADMYGIDPFDIQFSQYDSSEQLIQALIRHE    200
                     ::||||||.||||||||.|||:|.||.||||:|.||.||.::|:|||.||
RBAM_007800__    151 IKIGFAPGLGNDDQLSFARAAEMAGISPFDIRFFQYGSSNEVIEALISHE    200

BSNT_01276       201 IEAASMTLSEAKPYERNGDITLAAVTSDKRLPGFPNVPTWKEQGIPFVFS    250
                     |:|||||:|||:...|.|.||||||||||||.||.:||||||||:||||:
RBAM_007800__    201 IDAASMTISEARDAYRKGKITLAAVTSDKRLSGFSDVPTWKEQGVPFVFA    250

BSNT_01276       251 HWRGILGPKNMSEEEISYWDQALKKVTSSPEWKRKINEQDWESFYLNSRE    300
                     |||||:|||:|:|.||:|||||||::|||.|||:.:.::||||||.||..
RBAM_007800__    251 HWRGIMGPKDMTEGEIAYWDQALKQITSSAEWKQMLKKRDWESFYKNSSG    300

BSNT_01276       301 TKRFLEEQSAFYQSIMTGN-    319
                     .|||||||:.||:.:|:.. 
RBAM_007800__    301 AKRFLEEQTEFYKEMMSSEK    320


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