Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01267 and RBAM_007710

See DNA alignment / Visit BSNT_01267 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:56
# Commandline: needle
#    -asequence pep-align/BSNT_01267.1.9828.seq
#    -bsequence pep-align/RBAM_007710___yflT.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01267-RBAM_007710___yflT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01267-RBAM_007710___yflT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01267
# 2: RBAM_007710___yflT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 115
# Identity:      47/115 (40.9%)
# Similarity:    52/115 (45.2%)
# Gaps:          63/115 (54.8%)
# Score: 253.0
# 
#
#=======================================

BSNT_01267         0 --------------------------------------------------      0
                                                                       
RBAM_007710__      1 MKPVVREYTNDQKLMQDVKELQQLGVAKEDVYVLSHDDDRTDRLADNTDV     50

BSNT_01267         1 -------------MGNIFNKKGDELRNKIHEIGFSEDEAAQFEKRLDEGK     37
                                  :||:|||||||||||||||||||:||:||||||||||
RBAM_007710__     51 NTIGAKETGIKHAVGNMFNKKGDELRNKIHEIGFSEEEASQFEKRLDEGK    100

BSNT_01267        38 VLLFVTDNEKVKAWA     52
                     ||||||||||||:||
RBAM_007710__    101 VLLFVTDNEKVKSWA    115


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