Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01267 and RBAM_007710
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:56
# Commandline: needle
# -asequence dna-align/BSNT_01267.1.9828.seq
# -bsequence dna-align/RBAM_007710___yflT.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01267-RBAM_007710___yflT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01267-RBAM_007710___yflT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01267
# 2: RBAM_007710___yflT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 348
# Identity: 138/348 (39.7%)
# Similarity: 138/348 (39.7%)
# Gaps: 189/348 (54.3%)
# Score: 606.0
#
#
#=======================================
BSNT_01267 0 -------------------------------------------------- 0
RBAM_007710__ 1 ATGAAACCGGTAGTAAGAGAATATACAAATGATCAAAAACTGATGCAGGA 50
BSNT_01267 0 -------------------------------------------------- 0
RBAM_007710__ 51 CGTAAAAGAGCTTCAGCAATTGGGTGTCGCAAAAGAAGACGTATATGTGC 100
BSNT_01267 0 -------------------------------------------------- 0
RBAM_007710__ 101 TTTCTCATGATGACGACAGAACGGACCGCCTGGCCGATAATACTGATGTC 150
BSNT_01267 1 ---------------------------------------GTGGGAAATAT 11
||.||.|||||
RBAM_007710__ 151 AATACCATCGGAGCGAAAGAAACGGGCATTAAACACGCGGTCGGCAATAT 200
BSNT_01267 12 CTTCAATAAAAAAGGAGACGAGCTCCGCAATAAAATTCACGAAATCGGTT 61
.||.|||||||||||.||||||||||||||.|||||||||||||||||.|
RBAM_007710__ 201 GTTTAATAAAAAAGGCGACGAGCTCCGCAACAAAATTCACGAAATCGGCT 250
BSNT_01267 62 TTTCTGAAGATGAAGCCGCTCAATTTGAAAAACGCTTAGATGAAGGAAAA 111
||||.|||||.|||||..|.|||||||||||.||||||||||||||||||
RBAM_007710__ 251 TTTCGGAAGAGGAAGCATCGCAATTTGAAAAGCGCTTAGATGAAGGAAAA 300
BSNT_01267 112 GTGCTTCTCTTTGTGACAGATAACGAAAAAGTGAAAGCTTGGGCATAA 159
||.|||||.|||||.||.||||||||||||||.|||.|.|||||.|||
RBAM_007710__ 301 GTTCTTCTGTTTGTCACGGATAACGAAAAAGTAAAATCATGGGCGTAA 348
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