Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01264 and RBAM_007660

See DNA alignment / Visit BSNT_01264 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:56
# Commandline: needle
#    -asequence pep-align/BSNT_01264___yfmM.1.9828.seq
#    -bsequence pep-align/RBAM_007660___yfmM.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01264___yfmM-RBAM_007660___yfmM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01264___yfmM-RBAM_007660___yfmM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01264___yfmM
# 2: RBAM_007660___yfmM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 518
# Identity:     503/518 (97.1%)
# Similarity:   516/518 (99.6%)
# Gaps:           0/518 ( 0.0%)
# Score: 2617.0
# 
#
#=======================================

BSNT_01264___      1 MSILSVKDLSHGFGDRAIFNNVSFRLLKGEHVGLIGANGEGKSTFMNIIT     50
                     |||||||||||||||||:||||||||||||||||||||||||||||||||
RBAM_007660__      1 MSILSVKDLSHGFGDRALFNNVSFRLLKGEHVGLIGANGEGKSTFMNIIT     50

BSNT_01264___     51 GKLEPDEGKVEWSKNVRVGYLDQHTVLEKGKSIRDVLKDAFHYLFAMEEE    100
                     ||||||||||||:||||||||||||||||||:||||||||||||||||||
RBAM_007660__     51 GKLEPDEGKVEWAKNVRVGYLDQHTVLEKGKTIRDVLKDAFHYLFAMEEE    100

BSNT_01264___    101 MNEIYNKMGEADPDELEKLLEEVGVIQDALTNNDFYVIDSKVEEIARGLG    150
                     |||||||||||||||||:|||:||||||||||||||||||||||||||||
RBAM_007660__    101 MNEIYNKMGEADPDELEQLLEDVGVIQDALTNNDFYVIDSKVEEIARGLG    150

BSNT_01264___    151 LSDIGLERDVTDLSGGQRTKVLLAKLLLEKPEILLLDEPTNYLDEQHIEW    200
                     |.|:||:|||||||||||||||||||||||||||||||||||||||||||
RBAM_007660__    151 LQDVGLDRDVTDLSGGQRTKVLLAKLLLEKPEILLLDEPTNYLDEQHIEW    200

BSNT_01264___    201 LKRYLQEYENAFILISHDIPFLNSVINLIYHVENQELTRYVGDYHQFMEV    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_007660__    201 LKRYLQEYENAFILISHDIPFLNSVINLIYHVENQELTRYVGDYHQFMEV    250

BSNT_01264___    251 YEVKKQQLEAAYKKQQQEVAELKDFVARNKARVSTRNMAMSRQKKLDKMD    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_007660__    251 YEVKKQQLEAAYKKQQQEVAELKDFVARNKARVSTRNMAMSRQKKLDKMD    300

BSNT_01264___    301 MIELAAEKPKPEFHFKPARTSGKLIFETKDLVIGYDSPLSRPLNLRMERG    350
                     ||||||||||||||||||||||||||||||||||||:|||||||||||||
RBAM_007660__    301 MIELAAEKPKPEFHFKPARTSGKLIFETKDLVIGYDTPLSRPLNLRMERG    350

BSNT_01264___    351 QKIALYGANGIGKTTLLKSLLGEIQPLEGSVERGEHIYTGYFEQEVKETN    400
                     ||:||||||||||||||||||||||||||:||||||.|||||||||||||
RBAM_007660__    351 QKVALYGANGIGKTTLLKSLLGEIQPLEGTVERGEHQYTGYFEQEVKETN    400

BSNT_01264___    401 NNTCIEEVWSEFPSYTQYEIRAALAKCGLTTKHIESRVAVLSGGEKAKVR    450
                     ||||||||||||||:|||||||||||||||||||||||:|||||||||||
RBAM_007660__    401 NNTCIEEVWSEFPSFTQYEIRAALAKCGLTTKHIESRVSVLSGGEKAKVR    450

BSNT_01264___    451 LCKLINSETNLLVLDEPTNHLDVDAKEELKRALKEYKGSILLISHEPDFY    500
                     |||||||||||||||||||||||||||||||||||||||||||||||:||
RBAM_007660__    451 LCKLINSETNLLVLDEPTNHLDVDAKEELKRALKEYKGSILLISHEPEFY    500

BSNT_01264___    501 MDIATETWNCESWTTKVL    518
                     ||||||||||||||||||
RBAM_007660__    501 MDIATETWNCESWTTKVL    518


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