Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01264 and RBAM_007660

See Amino acid alignment / Visit BSNT_01264 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:56
# Commandline: needle
#    -asequence dna-align/BSNT_01264___yfmM.1.9828.seq
#    -bsequence dna-align/RBAM_007660___yfmM.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01264___yfmM-RBAM_007660___yfmM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01264___yfmM-RBAM_007660___yfmM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01264___yfmM
# 2: RBAM_007660___yfmM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1560
# Identity:    1328/1560 (85.1%)
# Similarity:  1328/1560 (85.1%)
# Gaps:           6/1560 ( 0.4%)
# Score: 5695.0
# 
#
#=======================================

BSNT_01264___      1 ATGAGTATTTTATCTGTAAAGGATTTAAGCCACGGCTTCGGGGACCGGGC     50
                     ||||||||||||||.|||||.|||||||||||||||||.||.|||||.||
RBAM_007660__      1 ATGAGTATTTTATCCGTAAAAGATTTAAGCCACGGCTTTGGTGACCGTGC     50

BSNT_01264___     51 CATTTTTAATAACGTTTCCTTCCGCCTGTTAAAAGGCGAGCACGTCGGCT    100
                     ..|||||||.||.||.||.|||||.||.||||||||.||.||||||||||
RBAM_007660__     51 GCTTTTTAACAATGTATCGTTCCGTCTTTTAAAAGGGGAACACGTCGGCT    100

BSNT_01264___    101 TGATCGGCGCAAACGGTGAAGGAAAATCAACCTTCATGAATATTATTACC    150
                     |.|||||.||||||||.|||||.||||||||.||.|||||||||||||||
RBAM_007660__    101 TAATCGGAGCAAACGGCGAAGGTAAATCAACGTTTATGAATATTATTACC    150

BSNT_01264___    151 GGAAAGCTTGAACCTGATGAGGGAAAAGTCGAATGGTCAAAAAATGTCCG    200
                     |||||||||||.|||||||||||.||.||.||||||.|.|||||.||.||
RBAM_007660__    151 GGAAAGCTTGAGCCTGATGAGGGTAAGGTTGAATGGGCGAAAAACGTGCG    200

BSNT_01264___    201 TGTCGGCTATCTGGATCAGCATACCGTGCTGGAAAAAGGAAAATCTATTC    250
                     .||||||||.||.|||||||||||||||||.||||||||||||.|.||.|
RBAM_007660__    201 CGTCGGCTACCTCGATCAGCATACCGTGCTTGAAAAAGGAAAAACGATCC    250

BSNT_01264___    251 GCGACGTCCTGAAAGACGCGTTCCATTATCTATTTGCGATGGAAGAGGAA    300
                     |||||||.||||||||.|||||||||||..||||||||||||||||||||
RBAM_007660__    251 GCGACGTGCTGAAAGATGCGTTCCATTACTTATTTGCGATGGAAGAGGAA    300

BSNT_01264___    301 ATGAACGAGATTTACAACAAAATGGGTGAAGCAGATCCCGACGAGCTCGA    350
                     |||||.||||||||||||||||||||.|||||.||.||.||.|||||.||
RBAM_007660__    301 ATGAATGAGATTTACAACAAAATGGGCGAAGCGGACCCTGATGAGCTTGA    350

BSNT_01264___    351 AAAGCTGCTTGAAGAAGTCGGCGTCATTCAAGACGCGCTGACAAACAATG    400
                     ..|||||||||||||.|||||.||||||||||||||.|||||||||||||
RBAM_007660__    351 GCAGCTGCTTGAAGATGTCGGTGTCATTCAAGACGCCCTGACAAACAATG    400

BSNT_01264___    401 ATTTTTATGTCATTGATTCCAAGGTGGAAGAAATCGCCCGCGGTCTCGGT    450
                     |.||.||.||.|||||...|||.||.|||||||||||||||||.|||||.
RBAM_007660__    401 ACTTCTACGTGATTGACAGCAAAGTTGAAGAAATCGCCCGCGGCCTCGGC    450

BSNT_01264___    451 TTG-AGCGATATCGGATTAGAGCGAGATGTCACCGATTTGAGCGGCGGAC    499
                     .|| || |||.|||||.|.||.||.||.|||||.|||||.||||||||||
RBAM_007660__    451 CTGCAG-GATGTCGGACTTGACCGCGACGTCACAGATTTAAGCGGCGGAC    499

BSNT_01264___    500 AGCGCACAAAGGTCCTTCTCGCTAAGCTGCTCCTTGAAAAGCCGGAAATT    549
                     ||||.||.||.||.||.|||||.||.|||||..|.|||||.||||||||.
RBAM_007660__    500 AGCGGACGAAAGTGCTGCTCGCCAAACTGCTTTTGGAAAAACCGGAAATC    549

BSNT_01264___    550 CTGCTTCTCGATGAGCCGACCAACTATCTTGATGAACAGCATATTGAATG    599
                     ||.||..|.||.||.|||||||||||.|||||||||||||||||||||||
RBAM_007660__    550 CTTCTGTTGGACGAACCGACCAACTACCTTGATGAACAGCATATTGAATG    599

BSNT_01264___    600 GCTGAAACGCTACCTGCAGGAATACGAGAACGCGTTCATCCTGATTTCCC    649
                     ||||||||||||..||||||||||.||.||.|||||||||.|.|||||.|
RBAM_007660__    600 GCTGAAACGCTATTTGCAGGAATATGAAAATGCGTTCATCTTAATTTCTC    649

BSNT_01264___    650 ACGATATTCCGTTCTTGAATAGTGTCATCAACCTGATTTATCACGTTGAA    699
                     ||||.||||||||.||.||.||.||.|||||..||||||||||.||.|||
RBAM_007660__    650 ACGACATTCCGTTTTTAAACAGCGTGATCAATTTGATTTATCATGTGGAA    699

BSNT_01264___    700 AATCAAGAGCTGACACGCTATGTCGGCGACTACCATCAGTTTATGGAAGT    749
                     |||||.||||||||.||.||||||||||||||||||||||||||||||||
RBAM_007660__    700 AATCAGGAGCTGACGCGTTATGTCGGCGACTACCATCAGTTTATGGAAGT    749

BSNT_01264___    750 CTACGAGGTGAAGAAACAGCAGCTTGAAGCGGCCTATAAAAAGCAGCAGC    799
                     .|||||.|||||.|||||||||||.|||||.|||||||||||.|||||||
RBAM_007660__    750 ATACGAAGTGAAAAAACAGCAGCTCGAAGCCGCCTATAAAAAACAGCAGC    799

BSNT_01264___    800 AGGAAGTCGCAGAGCTGAAGGATTTCGTCGCCCGCAACAAAGCGCGCGTC    849
                     |||||||.||.||||||||.||||||||||||||||||||||||||||||
RBAM_007660__    800 AGGAAGTGGCTGAGCTGAAAGATTTCGTCGCCCGCAACAAAGCGCGCGTC    849

BSNT_01264___    850 AGCACGAGAAACATGGCGATGTCCCGCCAAAAGAAACTCGATAAGATGGA    899
                     |||||||||||.|||||||||||||||||.||.||.||.|||||||||||
RBAM_007660__    850 AGCACGAGAAATATGGCGATGTCCCGCCAGAAAAAGCTTGATAAGATGGA    899

BSNT_01264___    900 TATGATCGAGCTTGCGGCAGAAAAGCCAAAGCCGGAATTCCACTTTAAGC    949
                     |||||||||.||.|||||.|||||.||.||.|||||||||||.||.||||
RBAM_007660__    900 TATGATCGAACTGGCGGCCGAAAAACCGAAACCGGAATTCCATTTCAAGC    949

BSNT_01264___    950 CGGCGAGAACGTCAGGCAAGCTGATTTTTGAAACAAAGGATCTCGTGATC    999
                     |.||||||||||||||||||||.|||||||||||.|||||..|.||.|||
RBAM_007660__    950 CTGCGAGAACGTCAGGCAAGCTCATTTTTGAAACGAAGGACTTAGTCATC    999

BSNT_01264___   1000 GGTTACGATTCCCCGCTGTCCCGTCCGCTCAACCTCCGCATGGAGCGCGG   1049
                     ||.||||||.|.||||||||.||.||||||||.|||.|.|||||||||||
RBAM_007660__   1000 GGCTACGATACTCCGCTGTCACGCCCGCTCAATCTCAGAATGGAGCGCGG   1049

BSNT_01264___   1050 CCAAAAAATCGCCCTTTACGGCGCAAACGGGATCGGAAAAACGACGTTGC   1099
                     .||.|||.|||||||.||||||||||||||.|||||.||.||||||.||.
RBAM_007660__   1050 ACAGAAAGTCGCCCTGTACGGCGCAAACGGCATCGGGAAGACGACGCTGT   1099

BSNT_01264___   1100 TGAAAAGTTTGCTTGGTGAAATCCAGCCGCTCGAAGGCTCTGTAGAACGC   1149
                     |.|||||..||||.|||||||||||||||||.||||||.|.||.|||||.
RBAM_007660__   1100 TAAAAAGCCTGCTCGGTGAAATCCAGCCGCTGGAAGGCACGGTGGAACGG   1149

BSNT_01264___   1150 GGTGAGCACATC--TATACCGGCTATTTCGAGCAAGAGGTCAAGGAAACA   1197
                     ||.|||  ||||  ||.||.||||||||||||||.||.||.||.|||||.
RBAM_007660__   1150 GGCGAG--CATCAATACACGGGCTATTTCGAGCAGGAAGTGAAAGAAACC   1197

BSNT_01264___   1198 AACAACAATACGTGCATCGAAGAAGTATGGAGCGAATTCCCTTCTTATAC   1247
                     ||.|||||||||||||||||||||||.|||||||||||.|||||.|.|||
RBAM_007660__   1198 AATAACAATACGTGCATCGAAGAAGTGTGGAGCGAATTTCCTTCCTTTAC   1247

BSNT_01264___   1248 GCAGTATGAAATCCGTGCCGCTTTGGCAAAATGCGGACTGACGACAAAGC   1297
                     .|||||.||||||||.|||||..|.||.||||||||.||||||||.||.|
RBAM_007660__   1248 CCAGTACGAAATCCGCGCCGCCCTCGCCAAATGCGGCCTGACGACCAAAC   1297

BSNT_01264___   1298 ATATCGAAAGCCGCGTCGCCGTATTAAGCGGAGGCGAAAAAGCGAAAGTC   1347
                     |.||.||||||||||||.||||..|.||||||||.|||||||||||.|||
RBAM_007660__   1298 ACATTGAAAGCCGCGTCTCCGTTCTCAGCGGAGGAGAAAAAGCGAAGGTC   1347

BSNT_01264___   1348 AGATTGTGCAAGCTAATCAACTCAGAAACAAACCTGCTGGTGCTCGATGA   1397
                     |||.||||||||||.|||||.|||||||||||||||||.|||||.||.||
RBAM_007660__   1348 AGACTGTGCAAGCTGATCAATTCAGAAACAAACCTGCTCGTGCTTGACGA   1397

BSNT_01264___   1398 GCCGACAAACCACTTGGATGTCGATGCCAAGGAAGAGCTCAAGCGCGCCC   1447
                     .||||||||||||.|||||||||||||.||.||||||||.||.||.||.|
RBAM_007660__   1398 ACCGACAAACCACCTGGATGTCGATGCGAAAGAAGAGCTGAAACGTGCGC   1447

BSNT_01264___   1448 TGAAAGAATATAAAGGCTCCATTCTGCTCATTTCCCACGAGCCAGACTTT   1497
                     ||||||||||.||||||||.||||||||.|||||||||||.||.||.||.
RBAM_007660__   1448 TGAAAGAATACAAAGGCTCTATTCTGCTGATTTCCCACGAACCCGAGTTC   1497

BSNT_01264___   1498 TATATGGATATCGCGACAGAAACGTGGAACTGCGAGTCTTGGACGACGAA   1547
                     ||.||||||||||||||.|||||.|||||.||.||.||||||||||||||
RBAM_007660__   1498 TACATGGATATCGCGACGGAAACATGGAATTGTGAATCTTGGACGACGAA   1547

BSNT_01264___   1548 AGTGCTTTAA   1557
                     ||||||.|||
RBAM_007660__   1548 AGTGCTGTAA   1557


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