Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01259 and RBAM_007640

See DNA alignment / Visit BSNT_01259 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:56
# Commandline: needle
#    -asequence pep-align/BSNT_01259___yfmP.1.9828.seq
#    -bsequence pep-align/RBAM_007640___yfmP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01259___yfmP-RBAM_007640___yfmP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01259___yfmP-RBAM_007640___yfmP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01259___yfmP
# 2: RBAM_007640___yfmP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 140
# Identity:     126/140 (90.0%)
# Similarity:   130/140 (92.9%)
# Gaps:           0/140 ( 0.0%)
# Score: 631.0
# 
#
#=======================================

BSNT_01259___      1 MEWMKIDQVAKRSGLTKRTIRFYEEIGLIPAPKRTDGGVRLYSEDDMEEL     50
                     |||||||||||||||||||||||||||||||||||:||||||||||||||
RBAM_007640__      1 MEWMKIDQVAKRSGLTKRTIRFYEEIGLIPAPKRTEGGVRLYSEDDMEEL     50

BSNT_01259___     51 EKVISTKEVLGFSLQELQHFMETSRQLELNKEGYLLSLDPKERKEKLEEI    100
                     |||.||||||||||||||.|||.|||||||||||||||||||||||||||
RBAM_007640__     51 EKVTSTKEVLGFSLQELQQFMEMSRQLELNKEGYLLSLDPKERKEKLEEI    100

BSNT_01259___    101 QETLNHQLSLIDEKIRTFQSFKERLQGMKGKAERAIQSIE    140
                     |:.|||||.:|||||.|||.||.||.|||.||:|||||||
RBAM_007640__    101 QQALNHQLEMIDEKISTFQHFKTRLNGMKEKADRAIQSIE    140


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