Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01259 and RBAM_007640

See Amino acid alignment / Visit BSNT_01259 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:56
# Commandline: needle
#    -asequence dna-align/BSNT_01259___yfmP.1.9828.seq
#    -bsequence dna-align/RBAM_007640___yfmP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01259___yfmP-RBAM_007640___yfmP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01259___yfmP-RBAM_007640___yfmP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01259___yfmP
# 2: RBAM_007640___yfmP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 426
# Identity:     357/426 (83.8%)
# Similarity:   357/426 (83.8%)
# Gaps:           6/426 ( 1.4%)
# Score: 1492.0
# 
#
#=======================================

BSNT_01259___      1 TTGGAATGGATGAAGATTGATCAAGTGGCCAAAAGAAGCGGGCTGACAAA     50
                     ||||||||||||||||||||||||||.|||||..|||||||..|||||||
RBAM_007640__      1 TTGGAATGGATGAAGATTGATCAAGTTGCCAAGCGAAGCGGATTGACAAA     50

BSNT_01259___     51 GCGGACCATCCGGTTTTATGAAGAAATCGGCTTGATTCCGGCGCCGAAAC    100
                     .||.|||||.||.|||||.||.||.||.||.||||||||.||.||.||||
RBAM_007640__     51 ACGAACCATTCGTTTTTACGAGGAGATTGGTTTGATTCCTGCTCCTAAAC    100

BSNT_01259___    101 GGACAGACGGCGGTGTAAGGCTTTATTCAGAGGATGATATGGAGGAGCTT    150
                     |||||||.|||||.||..|||||||.||.||.|||||||||||||||||.
RBAM_007640__    101 GGACAGAAGGCGGCGTCCGGCTTTACTCTGAAGATGATATGGAGGAGCTC    150

BSNT_01259___    151 GAGAAAGTCATCAGCACAAAAGAGGTGCTCGGTTTTTCCCTTCAGGAGCT    200
                     ||.|||||.|.||||||||||||.||||||||||||||||||||||||||
RBAM_007640__    151 GAAAAAGTAACCAGCACAAAAGAAGTGCTCGGTTTTTCCCTTCAGGAGCT    200

BSNT_01259___    201 TCAGCATTTCATGGAAACCAGCCGCCAGCTAGAGTTAAACAAAGAGGGGT    250
                     ||||||.||.|||||.|..|||||.|||||.||.||||||||||||||||
RBAM_007640__    201 TCAGCAGTTTATGGAGATGAGCCGTCAGCTGGAATTAAACAAAGAGGGGT    250

BSNT_01259___    251 ATTTGTTGTCACTGGATCCTAAGGAACGGAAAGAAAAACTGGAGGAAATT    300
                     |.|||||||||||||||||.|||||||||||||||||.|||||.||.|||
RBAM_007640__    251 ACTTGTTGTCACTGGATCCGAAGGAACGGAAAGAAAAGCTGGAAGAGATT    300

BSNT_01259___    301 CAGGAAACCCTGAATCACCAGC-TGAGTTTGATTGATGAGAAAATCCGCA    349
                     |||.|..|..||||.||||||| |||| .|||||||||||||.|||.|||
RBAM_007640__    301 CAGCAGGCTTTGAACCACCAGCTTGAG-ATGATTGATGAGAAGATCAGCA    349

BSNT_01259___    350 CATTCCAAAGC--TTTAAAGAACGCCTGCAAGGCATGAAAGGTAAAGCGG    397
                     ||||.|  |||  ||||||...|||||..|.||.|||||||..|||||.|
RBAM_007640__    350 CATTTC--AGCATTTTAAAACGCGCCTTAACGGAATGAAAGAAAAAGCTG    397

BSNT_01259___    398 AACGCGCCATTCAATCAATCGAATGA    423
                     |.||||||||||||||||||||||||
RBAM_007640__    398 ACCGCGCCATTCAATCAATCGAATGA    423


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