Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01259 and RBAM_007640
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:56
# Commandline: needle
# -asequence dna-align/BSNT_01259___yfmP.1.9828.seq
# -bsequence dna-align/RBAM_007640___yfmP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01259___yfmP-RBAM_007640___yfmP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01259___yfmP-RBAM_007640___yfmP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01259___yfmP
# 2: RBAM_007640___yfmP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 426
# Identity: 357/426 (83.8%)
# Similarity: 357/426 (83.8%)
# Gaps: 6/426 ( 1.4%)
# Score: 1492.0
#
#
#=======================================
BSNT_01259___ 1 TTGGAATGGATGAAGATTGATCAAGTGGCCAAAAGAAGCGGGCTGACAAA 50
||||||||||||||||||||||||||.|||||..|||||||..|||||||
RBAM_007640__ 1 TTGGAATGGATGAAGATTGATCAAGTTGCCAAGCGAAGCGGATTGACAAA 50
BSNT_01259___ 51 GCGGACCATCCGGTTTTATGAAGAAATCGGCTTGATTCCGGCGCCGAAAC 100
.||.|||||.||.|||||.||.||.||.||.||||||||.||.||.||||
RBAM_007640__ 51 ACGAACCATTCGTTTTTACGAGGAGATTGGTTTGATTCCTGCTCCTAAAC 100
BSNT_01259___ 101 GGACAGACGGCGGTGTAAGGCTTTATTCAGAGGATGATATGGAGGAGCTT 150
|||||||.|||||.||..|||||||.||.||.|||||||||||||||||.
RBAM_007640__ 101 GGACAGAAGGCGGCGTCCGGCTTTACTCTGAAGATGATATGGAGGAGCTC 150
BSNT_01259___ 151 GAGAAAGTCATCAGCACAAAAGAGGTGCTCGGTTTTTCCCTTCAGGAGCT 200
||.|||||.|.||||||||||||.||||||||||||||||||||||||||
RBAM_007640__ 151 GAAAAAGTAACCAGCACAAAAGAAGTGCTCGGTTTTTCCCTTCAGGAGCT 200
BSNT_01259___ 201 TCAGCATTTCATGGAAACCAGCCGCCAGCTAGAGTTAAACAAAGAGGGGT 250
||||||.||.|||||.|..|||||.|||||.||.||||||||||||||||
RBAM_007640__ 201 TCAGCAGTTTATGGAGATGAGCCGTCAGCTGGAATTAAACAAAGAGGGGT 250
BSNT_01259___ 251 ATTTGTTGTCACTGGATCCTAAGGAACGGAAAGAAAAACTGGAGGAAATT 300
|.|||||||||||||||||.|||||||||||||||||.|||||.||.|||
RBAM_007640__ 251 ACTTGTTGTCACTGGATCCGAAGGAACGGAAAGAAAAGCTGGAAGAGATT 300
BSNT_01259___ 301 CAGGAAACCCTGAATCACCAGC-TGAGTTTGATTGATGAGAAAATCCGCA 349
|||.|..|..||||.||||||| |||| .|||||||||||||.|||.|||
RBAM_007640__ 301 CAGCAGGCTTTGAACCACCAGCTTGAG-ATGATTGATGAGAAGATCAGCA 349
BSNT_01259___ 350 CATTCCAAAGC--TTTAAAGAACGCCTGCAAGGCATGAAAGGTAAAGCGG 397
||||.| ||| ||||||...|||||..|.||.|||||||..|||||.|
RBAM_007640__ 350 CATTTC--AGCATTTTAAAACGCGCCTTAACGGAATGAAAGAAAAAGCTG 397
BSNT_01259___ 398 AACGCGCCATTCAATCAATCGAATGA 423
|.||||||||||||||||||||||||
RBAM_007640__ 398 ACCGCGCCATTCAATCAATCGAATGA 423
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