Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01256 and RBAM_007630
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:56
# Commandline: needle
# -asequence pep-align/BSNT_01256___yfmR.1.9828.seq
# -bsequence pep-align/RBAM_007630___yfmR.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01256___yfmR-RBAM_007630___yfmR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01256___yfmR-RBAM_007630___yfmR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01256___yfmR
# 2: RBAM_007630___yfmR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 629
# Identity: 550/629 (87.4%)
# Similarity: 591/629 (94.0%)
# Gaps: 0/629 ( 0.0%)
# Score: 2840.0
#
#
#=======================================
BSNT_01256___ 1 MSILKAENLYKTYGDKTLFDHISFHIEENERIGLIGPNGTGKSTLLKVIA 50
|||:|||||||||||||||||||||||||||||||||||||||||||.||
RBAM_007630__ 1 MSIIKAENLYKTYGDKTLFDHISFHIEENERIGLIGPNGTGKSTLLKTIA 50
BSNT_01256___ 51 GLESIEEGEITKSGSVQVEFLHQDPELPAGQTVLEHIYSGESAVMKTLRE 100
||||.||||||.||:|.:|||||||:||||||||||||||.||||:|:||
RBAM_007630__ 51 GLESTEEGEITASGNVHIEFLHQDPDLPAGQTVLEHIYSGGSAVMRTMRE 100
BSNT_01256___ 101 YEKALYELGKDPENEQRQKHLLAAQAKMDANNAWDANTLAKTVLSKLGVN 150
|||||..|.::|||:||||.||.|||:||||:||:|||||||||:||||.
RBAM_007630__ 101 YEKALQALNEEPENDQRQKQLLDAQARMDANDAWEANTLAKTVLTKLGVT 150
BSNT_01256___ 151 DVTKPVNELSGGQKKRVAIAKNLIQPADLLILDEPTNHLDNETIEWLEGY 200
|:.|.|:||||||:||||||||:|||||||||||||||||||||||||||
RBAM_007630__ 151 DLMKDVSELSGGQRKRVAIAKNVIQPADLLILDEPTNHLDNETIEWLEGY 200
BSNT_01256___ 201 LSQYPGAVMLVTHDRYFLNRVTNRIYELERGSLYTYKGNYEVFLEKRAER 250
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_007630__ 201 LSQYPGAVMLVTHDRYFLNRVTNRIYELERGSLYTYKGNYEVFLEKRAER 250
BSNT_01256___ 251 EAQAEQKETKRQNLLRRELAWLRRGAKARSTKQKARIDRVETLKEQKGPQ 300
||.|||||||||||||||||||||||||||||||||:||.|.|||||||.
RBAM_007630__ 251 EALAEQKETKRQNLLRRELAWLRRGAKARSTKQKARVDRAEALKEQKGPA 300
BSNT_01256___ 301 SSGSLDFAIGSHRLGKQVIEAENVMIAYDGRMLVDRFNELVIPGERIGII 350
.||||||||||||||||||||:||.|.|:|:.|:.:||||||||||||||
RBAM_007630__ 301 VSGSLDFAIGSHRLGKQVIEADNVAITYNGQALISQFNELVIPGERIGII 350
BSNT_01256___ 351 GPNGIGKTTLLNALAGRHTPDGGDITIGQTVRIGYYTQDHSEMNGELKVI 400
||||||||||||:||||..||.|:|||||||||||||||||||||::|||
RBAM_007630__ 351 GPNGIGKTTLLNSLAGRIQPDSGNITIGQTVRIGYYTQDHSEMNGDMKVI 400
BSNT_01256___ 401 DYIKETAEVVKTADGDMITAEQMLERFLFPRSMQQTYIRKLSGGEKRRLY 450
:|||||||:||||:||:||||||||||||||.||||||||||||||||||
RBAM_007630__ 401 EYIKETAEIVKTAEGDVITAEQMLERFLFPRPMQQTYIRKLSGGEKRRLY 450
BSNT_01256___ 451 LLQVLMQEPNVLFLDEPTNDLDTETLSVLEDYIDQFPGVVITVSHDRYFL 500
||.||||||||||||||||||||||||||||||:||||||||||||||||
RBAM_007630__ 451 LLNVLMQEPNVLFLDEPTNDLDTETLSVLEDYIEQFPGVVITVSHDRYFL 500
BSNT_01256___ 501 DRVVDRLIVFEGNGVISRFQGSYSDYMEESKAKKAAQKPTAEEKTAEAEP 550
|||:||||||||.|||||||||||:|||.:||||.|.|..||||..|.||
RBAM_007630__ 501 DRVIDRLIVFEGQGVISRFQGSYSEYMEHAKAKKTAVKQPAEEKKTEEEP 550
BSNT_01256___ 551 KKKRKKLSYKDQLEWDGIEDKIAQLEEKHEQLEADIAAAGSDFGKIQELM 600
||||||||||||:||||||||||.|||||::|||:||.||||||||||||
RBAM_007630__ 551 KKKRKKLSYKDQIEWDGIEDKIAGLEEKHQRLEAEIAEAGSDFGKIQELM 600
BSNT_01256___ 601 AEQAKTAEELEAAMDRWTELSLMIEELES 629
||||||||||||||:|||||||||||||:
RBAM_007630__ 601 AEQAKTAEELEAAMERWTELSLMIEELEN 629
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