Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01769 and RBAM_007610
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:28
# Commandline: needle
# -asequence pep-align/BSNT_01769___yhxD.1.9828.seq
# -bsequence pep-align/RBAM_007610___yhxD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01769___yhxD-RBAM_007610___yhxD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01769___yhxD-RBAM_007610___yhxD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01769___yhxD
# 2: RBAM_007610___yhxD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 299
# Identity: 253/299 (84.6%)
# Similarity: 275/299 (92.0%)
# Gaps: 0/299 ( 0.0%)
# Score: 1321.0
#
#
#=======================================
BSNT_01769___ 1 MSDSNLTNPIKAFFHDEFPEQYQEPPGLQKNMKPVPDCGEKSYKRSGKLT 50
|||:||.||:..:.|||||:||||||||||.|||||||||.|||.:|||.
RBAM_007610__ 1 MSDANLHNPLTKYDHDEFPKQYQEPPGLQKEMKPVPDCGETSYKGAGKLK 50
BSNT_01769___ 51 GRKALVTGGDSGIGRAAAIAYAREGADVAINYLPEEQPDAEEVKELIEAE 100
||||||||||||||||||||||||||||||||||||||||||||.|||.|
RBAM_007610__ 51 GRKALVTGGDSGIGRAAAIAYAREGADVAINYLPEEQPDAEEVKALIEKE 100
BSNT_01769___ 101 GRKAVLIPGDLSDESFCQDLVKQAQQELGGLDVLALVAGKQKAVENIEDL 150
||||||:|||||||:||.:|.::|.|||||||.||||||||:||::|.||
RBAM_007610__ 101 GRKAVLLPGDLSDEAFCGELAEKAYQELGGLDTLALVAGKQQAVDDISDL 150
BSNT_01769___ 151 PTEQIYKTFEVNVFSLYWVVKAALPYLPEGASIITTTSVEGYNPSPMLLD 200
.|||||:|||||||||||:|||||||||||||||||||||||||||||||
RBAM_007610__ 151 ATEQIYQTFEVNVFSLYWLVKAALPYLPEGASIITTTSVEGYNPSPMLLD 200
BSNT_01769___ 201 YAATKNAIIGFTVGLGKQLASKGIRVNSVAPGPIWTPLQISGGQPTENIP 250
|||||:||||||||||||||:||||||||||||||||||||||||.||||
RBAM_007610__ 201 YAATKHAIIGFTVGLGKQLANKGIRVNSVAPGPIWTPLQISGGQPGENIP 250
BSNT_01769___ 251 KFGQGTPPAPLTRAGQPAELADVYVFLASENSSYVTSQVYGITGGIPTA 299
|||:.||..||.|||||||||.:|||||||.|||||||:|.::||||||
RBAM_007610__ 251 KFGKETPAVPLKRAGQPAELAGIYVFLASEESSYVTSQIYSVSGGIPTA 299
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