Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01769 and RBAM_007610

See DNA alignment / Visit BSNT_01769 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:28
# Commandline: needle
#    -asequence pep-align/BSNT_01769___yhxD.1.9828.seq
#    -bsequence pep-align/RBAM_007610___yhxD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01769___yhxD-RBAM_007610___yhxD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01769___yhxD-RBAM_007610___yhxD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01769___yhxD
# 2: RBAM_007610___yhxD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 299
# Identity:     253/299 (84.6%)
# Similarity:   275/299 (92.0%)
# Gaps:           0/299 ( 0.0%)
# Score: 1321.0
# 
#
#=======================================

BSNT_01769___      1 MSDSNLTNPIKAFFHDEFPEQYQEPPGLQKNMKPVPDCGEKSYKRSGKLT     50
                     |||:||.||:..:.|||||:||||||||||.|||||||||.|||.:|||.
RBAM_007610__      1 MSDANLHNPLTKYDHDEFPKQYQEPPGLQKEMKPVPDCGETSYKGAGKLK     50

BSNT_01769___     51 GRKALVTGGDSGIGRAAAIAYAREGADVAINYLPEEQPDAEEVKELIEAE    100
                     ||||||||||||||||||||||||||||||||||||||||||||.|||.|
RBAM_007610__     51 GRKALVTGGDSGIGRAAAIAYAREGADVAINYLPEEQPDAEEVKALIEKE    100

BSNT_01769___    101 GRKAVLIPGDLSDESFCQDLVKQAQQELGGLDVLALVAGKQKAVENIEDL    150
                     ||||||:|||||||:||.:|.::|.|||||||.||||||||:||::|.||
RBAM_007610__    101 GRKAVLLPGDLSDEAFCGELAEKAYQELGGLDTLALVAGKQQAVDDISDL    150

BSNT_01769___    151 PTEQIYKTFEVNVFSLYWVVKAALPYLPEGASIITTTSVEGYNPSPMLLD    200
                     .|||||:|||||||||||:|||||||||||||||||||||||||||||||
RBAM_007610__    151 ATEQIYQTFEVNVFSLYWLVKAALPYLPEGASIITTTSVEGYNPSPMLLD    200

BSNT_01769___    201 YAATKNAIIGFTVGLGKQLASKGIRVNSVAPGPIWTPLQISGGQPTENIP    250
                     |||||:||||||||||||||:||||||||||||||||||||||||.||||
RBAM_007610__    201 YAATKHAIIGFTVGLGKQLANKGIRVNSVAPGPIWTPLQISGGQPGENIP    250

BSNT_01769___    251 KFGQGTPPAPLTRAGQPAELADVYVFLASENSSYVTSQVYGITGGIPTA    299
                     |||:.||..||.|||||||||.:|||||||.|||||||:|.::||||||
RBAM_007610__    251 KFGKETPAVPLKRAGQPAELAGIYVFLASEESSYVTSQIYSVSGGIPTA    299


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