Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01253 and RBAM_007600

See DNA alignment / Visit BSNT_01253 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:55
# Commandline: needle
#    -asequence pep-align/BSNT_01253___yfmS.1.9828.seq
#    -bsequence pep-align/RBAM_007600___yfmS.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01253___yfmS-RBAM_007600___yfmS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01253___yfmS-RBAM_007600___yfmS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01253___yfmS
# 2: RBAM_007600___yfmS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 286
# Identity:     251/286 (87.8%)
# Similarity:   274/286 (95.8%)
# Gaps:           2/286 ( 0.7%)
# Score: 1247.0
# 
#
#=======================================

BSNT_01253___      1 MELTINTEKETADILDAFIKVAPYLNSLVQDDITIGIYDTEKLLVNIPAK     50
                       ::|.||::|..:||||:||||:||||:||||||||||||||:||||||
RBAM_007600__      1 --MSIQTEQQTHSLLDAFVKVAPFLNSLIQDDITIGIYDTEKLIVNIPAK     48

BSNT_01253___     51 TFSLNVKAGDPLQEGDIITDAIRSNQKKTSMVPKELFGFPLIARAIPLHD    100
                     |||||||.|||||:|||||||||.||||||||||||||||||||||||||
RBAM_007600__     49 TFSLNVKPGDPLQKGDIITDAIRMNQKKTSMVPKELFGFPLIARAIPLHD     98

BSNT_01253___    101 ENGRVIGGVGLGTSLEESSKLHDVAESLSAVVEQTAAAISDISESINGFS    150
                     |||:||||||||||||:|:|||||||||||||||||:||:||||||:|||
RBAM_007600__     99 ENGKVIGGVGLGTSLEKSAKLHDVAESLSAVVEQTASAIADISESISGFS    148

BSNT_01253___    151 TQMSGISSQAKKVSESAGEIADISVTVKGISDQSNLLGLNAAIEAARAGE    200
                     .||:|||:|||:||||||||||||||||||||||||||||||||||||||
RBAM_007600__    149 AQMTGISTQAKQVSESAGEIADISVTVKGISDQSNLLGLNAAIEAARAGE    198

BSNT_01253___    201 SGKGFSVVADEIRKLATHSKENVGQIDQITKKIHSLLKGLEESIESINQH    250
                     ||||||||||||||||||||:||||||||||||||||||||:|||||||:
RBAM_007600__    199 SGKGFSVVADEIRKLATHSKDNVGQIDQITKKIHSLLKGLEDSIESINQN    248

BSNT_01253___    251 TDGQAAAVEQISATMQEISGSAQHLAKMAEKALEEE    286
                     |:||||||||||||||||||||||||||||..|.|.
RBAM_007600__    249 TNGQAAAVEQISATMQEISGSAQHLAKMAENVLGES    284


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