Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01253 and RBAM_007600

See Amino acid alignment / Visit BSNT_01253 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:56
# Commandline: needle
#    -asequence dna-align/BSNT_01253___yfmS.1.9828.seq
#    -bsequence dna-align/RBAM_007600___yfmS.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01253___yfmS-RBAM_007600___yfmS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01253___yfmS-RBAM_007600___yfmS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01253___yfmS
# 2: RBAM_007600___yfmS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 866
# Identity:     686/866 (79.2%)
# Similarity:   686/866 (79.2%)
# Gaps:          16/866 ( 1.8%)
# Score: 2723.0
# 
#
#=======================================

BSNT_01253___      1 ATGGAATTGACCATAAATACGGAAAAAGAAACCGCAGA-TATTCTGGACG     49
                           .|||..|||.|.|||| |..||.||.||||.| ..|.||.||||
RBAM_007600__      1 ------ATGAGTATACAGACGG-AGCAGCAAACGCACAGCCTGCTTGACG     43

BSNT_01253___     50 CATTTATCAAAGTAGCCCCTTATTTAAACAGCCTGGTTCAGGATGATATT     99
                     |||||.|||||||.||.||||.|||||||||||||.|.||.|||||.||.
RBAM_007600__     44 CATTTGTCAAAGTTGCGCCTTTTTTAAACAGCCTGATCCAAGATGACATC     93

BSNT_01253___    100 ACAATCGGCATTTATGATACGGAAAAACTGCTCGTGAATATACCGGCCAA    149
                     ||.|||||.|||||||||||.||||||.|..||||||||||.|||||.||
RBAM_007600__     94 ACCATCGGAATTTATGATACAGAAAAATTAATCGTGAATATTCCGGCTAA    143

BSNT_01253___    150 AACCTTTTCGCTGAACGTAAAAGCC-GGCGATCCGCTGCAGGAAGGGGAT    198
                     |||.|||||.||.||||| |||||| ||.||.||||||||..|||||||.
RBAM_007600__    144 AACGTTTTCTCTTAACGT-AAAGCCGGGAGACCCGCTGCAAAAAGGGGAC    192

BSNT_01253___    199 ATCATCACAGATGCCATCCGAAGCAATCAGAAGAAGACGAGCATGGTTCC    248
                     |||||.|||||.||.|||||.|..||||||||||||||.||||||||.||
RBAM_007600__    193 ATCATTACAGACGCGATCCGCATGAATCAGAAGAAGACAAGCATGGTGCC    242

BSNT_01253___    249 GAAAGAATTGTTCGGCTTCCCATTGATCGCGCGTGCCATCCCGCTGCACG    298
                     ||||||..|||||||.||.||..|||||||..|.||.||.|||||.||||
RBAM_007600__    243 GAAAGAGCTGTTCGGATTTCCGCTGATCGCCAGAGCGATTCCGCTTCACG    292

BSNT_01253___    299 ACGAGAATGGAAGAGTCATTGGAGGCGTCGGCCTCGGAACGAGCCTTGAG    348
                     |.||.||.||||.||||||.||.||||||||.|||||.|||||||||||.
RBAM_007600__    293 ATGAAAACGGAAAAGTCATCGGCGGCGTCGGTCTCGGCACGAGCCTTGAA    342

BSNT_01253___    349 GAGTCGTCAAAGCTGCATGATGTCGCGGAAAGCTTATCAGCTGTCGTTGA    398
                     .|.||..|.|||||.|||||||||||.||||||.|.||.||.|||||.||
RBAM_007600__    343 AAATCAGCCAAGCTTCATGATGTCGCTGAAAGCCTGTCCGCCGTCGTGGA    392

BSNT_01253___    399 ACAAACAGCCGCGGCTATTTCCGACATTTCTGAATCAATTAACGGGTTTT    448
                     |||.||.||..||||.||..|.||.||.||.|||||.||.|.|||.||.|
RBAM_007600__    393 ACAGACCGCTTCGGCCATCGCGGATATCTCAGAATCCATCAGCGGTTTCT    442

BSNT_01253___    449 CAACTCAAATGTCGGGCATTTCCTCTCAGGCGAAAAAAGTAAGCGAAAGC    498
                     ||.|.||.|||.|.||.||||||.|||||||||||.||||.||.||||||
RBAM_007600__    443 CAGCACAGATGACCGGGATTTCCACTCAGGCGAAACAAGTCAGTGAAAGC    492

BSNT_01253___    499 GCCGGTGAAATCGCCGATATTTCAGTAACTGTTAAAGGCATCTCTGACCA    548
                     ||.||.|||||||||||.|||||.||.|||||.||.||||||||.||.||
RBAM_007600__    493 GCGGGAGAAATCGCCGACATTTCCGTCACTGTCAAGGGCATCTCGGATCA    542

BSNT_01253___    549 AAGCAATCTGCTCGGCTTGAATGCCGCGATCGAAGCGGCAAGAGCAGGGG    598
                     |||||||||||||||.||||||||.||.||.|||||.||.||||||||.|
RBAM_007600__    543 AAGCAATCTGCTCGGTTTGAATGCGGCCATTGAAGCCGCGAGAGCAGGAG    592

BSNT_01253___    599 AGTCCGGAAAAGGGTTCTCTGTCGTCGCAGATGAGATCAGAAAGCTAGCG    648
                     |.|||||.||.||.||.||.||.||.||.|||||||||.|.|||||.||.
RBAM_007600__    593 AATCCGGCAAGGGCTTTTCCGTAGTGGCGGATGAGATCCGCAAGCTTGCC    642

BSNT_01253___    649 ACGCATTCAAAAGAAAATGTCGGCCAAATTGACCAGATTACGAAAAAAAT    698
                     ||.|||||||||||.||.||||||||||||||||||||||||||||||||
RBAM_007600__    643 ACTCATTCAAAAGACAACGTCGGCCAAATTGACCAGATTACGAAAAAAAT    692

BSNT_01253___    699 CCACAGCCTGCTGAAAGGGCTGGAGGAATCCATTGAGTCGATTAACCAGC    748
                     |||||||||||||||||||||||||||.||.|||||.||.||.||||||.
RBAM_007600__    693 CCACAGCCTGCTGAAAGGGCTGGAGGACTCTATTGAATCCATCAACCAGA    742

BSNT_01253___    749 ATACAGACGGACAAGCCGCTGCCGTTGAACAAATTTCCGCCACGATGCAG    798
                     |.|||.||||.|||||.||.||.||||||||||||||.||.|||||||||
RBAM_007600__    743 ACACAAACGGTCAAGCGGCGGCGGTTGAACAAATTTCTGCAACGATGCAG    792

BSNT_01253___    799 GAGATTTCAGGAAGCGCGCAGCATCTTGCAAAAATGGCTGAAAAAGCGCT    848
                     ||.|||||.||||||||.||||||.|.||.||||||||||||||.|..||
RBAM_007600__    793 GAAATTTCGGGAAGCGCCCAGCATTTAGCGAAAATGGCTGAAAACGTACT    842

BSNT_01253___    849 TGAGGAAGAGTAA---    861
                        .|.|||||.|   
RBAM_007600__    843 ---CGGAGAGTCATAA    855


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_01253 and RBAM_007600

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
