Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01253 and RBAM_007600
See
Amino acid alignment /
Visit
BSNT_01253 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:56
# Commandline: needle
# -asequence dna-align/BSNT_01253___yfmS.1.9828.seq
# -bsequence dna-align/RBAM_007600___yfmS.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01253___yfmS-RBAM_007600___yfmS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01253___yfmS-RBAM_007600___yfmS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01253___yfmS
# 2: RBAM_007600___yfmS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 866
# Identity: 686/866 (79.2%)
# Similarity: 686/866 (79.2%)
# Gaps: 16/866 ( 1.8%)
# Score: 2723.0
#
#
#=======================================
BSNT_01253___ 1 ATGGAATTGACCATAAATACGGAAAAAGAAACCGCAGA-TATTCTGGACG 49
.|||..|||.|.|||| |..||.||.||||.| ..|.||.||||
RBAM_007600__ 1 ------ATGAGTATACAGACGG-AGCAGCAAACGCACAGCCTGCTTGACG 43
BSNT_01253___ 50 CATTTATCAAAGTAGCCCCTTATTTAAACAGCCTGGTTCAGGATGATATT 99
|||||.|||||||.||.||||.|||||||||||||.|.||.|||||.||.
RBAM_007600__ 44 CATTTGTCAAAGTTGCGCCTTTTTTAAACAGCCTGATCCAAGATGACATC 93
BSNT_01253___ 100 ACAATCGGCATTTATGATACGGAAAAACTGCTCGTGAATATACCGGCCAA 149
||.|||||.|||||||||||.||||||.|..||||||||||.|||||.||
RBAM_007600__ 94 ACCATCGGAATTTATGATACAGAAAAATTAATCGTGAATATTCCGGCTAA 143
BSNT_01253___ 150 AACCTTTTCGCTGAACGTAAAAGCC-GGCGATCCGCTGCAGGAAGGGGAT 198
|||.|||||.||.||||| |||||| ||.||.||||||||..|||||||.
RBAM_007600__ 144 AACGTTTTCTCTTAACGT-AAAGCCGGGAGACCCGCTGCAAAAAGGGGAC 192
BSNT_01253___ 199 ATCATCACAGATGCCATCCGAAGCAATCAGAAGAAGACGAGCATGGTTCC 248
|||||.|||||.||.|||||.|..||||||||||||||.||||||||.||
RBAM_007600__ 193 ATCATTACAGACGCGATCCGCATGAATCAGAAGAAGACAAGCATGGTGCC 242
BSNT_01253___ 249 GAAAGAATTGTTCGGCTTCCCATTGATCGCGCGTGCCATCCCGCTGCACG 298
||||||..|||||||.||.||..|||||||..|.||.||.|||||.||||
RBAM_007600__ 243 GAAAGAGCTGTTCGGATTTCCGCTGATCGCCAGAGCGATTCCGCTTCACG 292
BSNT_01253___ 299 ACGAGAATGGAAGAGTCATTGGAGGCGTCGGCCTCGGAACGAGCCTTGAG 348
|.||.||.||||.||||||.||.||||||||.|||||.|||||||||||.
RBAM_007600__ 293 ATGAAAACGGAAAAGTCATCGGCGGCGTCGGTCTCGGCACGAGCCTTGAA 342
BSNT_01253___ 349 GAGTCGTCAAAGCTGCATGATGTCGCGGAAAGCTTATCAGCTGTCGTTGA 398
.|.||..|.|||||.|||||||||||.||||||.|.||.||.|||||.||
RBAM_007600__ 343 AAATCAGCCAAGCTTCATGATGTCGCTGAAAGCCTGTCCGCCGTCGTGGA 392
BSNT_01253___ 399 ACAAACAGCCGCGGCTATTTCCGACATTTCTGAATCAATTAACGGGTTTT 448
|||.||.||..||||.||..|.||.||.||.|||||.||.|.|||.||.|
RBAM_007600__ 393 ACAGACCGCTTCGGCCATCGCGGATATCTCAGAATCCATCAGCGGTTTCT 442
BSNT_01253___ 449 CAACTCAAATGTCGGGCATTTCCTCTCAGGCGAAAAAAGTAAGCGAAAGC 498
||.|.||.|||.|.||.||||||.|||||||||||.||||.||.||||||
RBAM_007600__ 443 CAGCACAGATGACCGGGATTTCCACTCAGGCGAAACAAGTCAGTGAAAGC 492
BSNT_01253___ 499 GCCGGTGAAATCGCCGATATTTCAGTAACTGTTAAAGGCATCTCTGACCA 548
||.||.|||||||||||.|||||.||.|||||.||.||||||||.||.||
RBAM_007600__ 493 GCGGGAGAAATCGCCGACATTTCCGTCACTGTCAAGGGCATCTCGGATCA 542
BSNT_01253___ 549 AAGCAATCTGCTCGGCTTGAATGCCGCGATCGAAGCGGCAAGAGCAGGGG 598
|||||||||||||||.||||||||.||.||.|||||.||.||||||||.|
RBAM_007600__ 543 AAGCAATCTGCTCGGTTTGAATGCGGCCATTGAAGCCGCGAGAGCAGGAG 592
BSNT_01253___ 599 AGTCCGGAAAAGGGTTCTCTGTCGTCGCAGATGAGATCAGAAAGCTAGCG 648
|.|||||.||.||.||.||.||.||.||.|||||||||.|.|||||.||.
RBAM_007600__ 593 AATCCGGCAAGGGCTTTTCCGTAGTGGCGGATGAGATCCGCAAGCTTGCC 642
BSNT_01253___ 649 ACGCATTCAAAAGAAAATGTCGGCCAAATTGACCAGATTACGAAAAAAAT 698
||.|||||||||||.||.||||||||||||||||||||||||||||||||
RBAM_007600__ 643 ACTCATTCAAAAGACAACGTCGGCCAAATTGACCAGATTACGAAAAAAAT 692
BSNT_01253___ 699 CCACAGCCTGCTGAAAGGGCTGGAGGAATCCATTGAGTCGATTAACCAGC 748
|||||||||||||||||||||||||||.||.|||||.||.||.||||||.
RBAM_007600__ 693 CCACAGCCTGCTGAAAGGGCTGGAGGACTCTATTGAATCCATCAACCAGA 742
BSNT_01253___ 749 ATACAGACGGACAAGCCGCTGCCGTTGAACAAATTTCCGCCACGATGCAG 798
|.|||.||||.|||||.||.||.||||||||||||||.||.|||||||||
RBAM_007600__ 743 ACACAAACGGTCAAGCGGCGGCGGTTGAACAAATTTCTGCAACGATGCAG 792
BSNT_01253___ 799 GAGATTTCAGGAAGCGCGCAGCATCTTGCAAAAATGGCTGAAAAAGCGCT 848
||.|||||.||||||||.||||||.|.||.||||||||||||||.|..||
RBAM_007600__ 793 GAAATTTCGGGAAGCGCCCAGCATTTAGCGAAAATGGCTGAAAACGTACT 842
BSNT_01253___ 849 TGAGGAAGAGTAA--- 861
.|.|||||.|
RBAM_007600__ 843 ---CGGAGAGTCATAA 855
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.