Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01247 and RBAM_007560

See DNA alignment / Visit BSNT_01247 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:55
# Commandline: needle
#    -asequence pep-align/BSNT_01247___yfnD.1.9828.seq
#    -bsequence pep-align/RBAM_007560___yfnD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01247___yfnD-RBAM_007560___yfnD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01247___yfnD-RBAM_007560___yfnD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01247___yfnD
# 2: RBAM_007560___yfnD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 312
# Identity:     226/312 (72.4%)
# Similarity:   254/312 (81.4%)
# Gaps:          21/312 ( 6.7%)
# Score: 1297.0
# 
#
#=======================================

BSNT_01247___      1 --------------------MIHSLHEHCDDFHLYVLCVDQKAYELLQHV     30
                                         |||||||||.||||||||||||||||||.|
RBAM_007560__      1 MSKYHFSTIVSRTHIFKLMPMIHSLHEHCRDFHLYVLCVDQKAYELLQQV     50

BSNT_01247___     31 PWEHVTFVQLHEMEDPELLKAKSNRTFHEYCWTLKPAFLFHVMSKWDDAE     80
                     ||||||.||||||||||||:||..|||||||||||||||||||:::|:||
RBAM_007560__     51 PWEHVTAVQLHEMEDPELLEAKGGRTFHEYCWTLKPAFLFHVMTEYDEAE    100

BSNT_01247___     81 YFAHMDTDLFFFSDPARIFAENPTASLYLTDHRNSPRFMSYYDRTGRFNT    130
                     ||||:|||||||||...:|||.|.|||:|||||||.||.|||..||::||
RBAM_007560__    101 YFAHLDTDLFFFSDAGELFAEKPDASLFLTDHRNSERFASYYKLTGQYNT    150

BSNT_01247___    131 GFVGAGNTKEAYEAVWQWRQDCIEFCTVEMDTERKTYGDQRYVEKWPEQF    180
                     |||||.||.|||.||||||||||.:|||||:.|:|||||||||||||.||
RBAM_007560__    151 GFVGARNTGEAYRAVWQWRQDCISYCTVEMNEEKKTYGDQRYVEKWPAQF    200

BSNT_01247___    181 KGVHVVKSIGANTALWNIENYKVGQKDGRVYIDETPLIFYHFSGFTLVTE    230
                     :.|||.:|||||.||||||.|.|..:.|.||:::||||||||||||||||
RBAM_007560__    201 EDVHVTESIGANAALWNIEQYDVSLRGGAVYVNDTPLIFYHFSGFTLVTE    250

BSNT_01247___    231 KEFNLCWYYRIEDEATIEMIYMPYILNLKRWIDEIQSAFPDFADGFIPKH    280
                     .||:|||||.|:||||:.|||:|||.|:|:||||||.|||||.||||||:
RBAM_007560__    251 NEFSLCWYYHIDDEATVNMIYVPYIKNVKKWIDEIQKAFPDFRDGFIPKY    300

BSNT_01247___    281 AVPDTHFIQLD-    291
                     |||||||..:: 
RBAM_007560__    301 AVPDTHFYTVET    312


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