Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01243 and RBAM_007520

See DNA alignment / Visit BSNT_01243 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:54
# Commandline: needle
#    -asequence pep-align/BSNT_01243___yfnH.1.9828.seq
#    -bsequence pep-align/RBAM_007520___yfnH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01243___yfnH-RBAM_007520___yfnH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01243___yfnH-RBAM_007520___yfnH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01243___yfnH
# 2: RBAM_007520___yfnH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 254
# Identity:     219/254 (86.2%)
# Similarity:   242/254 (95.3%)
# Gaps:           0/254 ( 0.0%)
# Score: 1200.0
# 
#
#=======================================

BSNT_01243___      1 MKAVILCGGKGTRMSEVTNDIPKPLAMIGGKPILWHIMKIYQYYGVNEFI     50
                     ||||||||||||||||:||:.||||||||||||||||||:||||||||||
RBAM_007520__      1 MKAVILCGGKGTRMSEITNERPKPLAMIGGKPILWHIMKLYQYYGVNEFI     50

BSNT_01243___     51 LLLGYKGEKIKEYFLDYEWKHNSLTLDSSTGEVQMLGQPETWKITFLETG    100
                     ||||:|||.||||||||:||::|:||||||||:::||:.|.||||||:||
RBAM_007520__     51 LLLGFKGEMIKEYFLDYDWKNHSMTLDSSTGELRILGKSEPWKITFLDTG    100

BSNT_01243___    101 EDTLTAGRILQAKDYIGDETFLLTYGDGLANINLFHLISYHQTKGAAATV    150
                     |.|.||||:|||||.|||||||:|||||||||||||||||||:|||||||
RBAM_007520__    101 EHTQTAGRLLQAKDIIGDETFLMTYGDGLANINLFHLISYHQSKGAAATV    150

BSNT_01243___    151 TGIDKVSQFGTLTVEDGMAKTFSEKTSSDGIINGGFFVLSPKVFDYLPKD    200
                     |||:|.||||||||||||||:|||||||||||||||||||||||||||||
RBAM_007520__    151 TGIEKTSQFGTLTVEDGMAKSFSEKTSSDGIINGGFFVLSPKVFDYLPKD    200

BSNT_01243___    201 GNTMFEDEPLKNLAKDGELAVYRHYGFWTAIDTYKNLLEVNKMWNQGQQV    250
                     .:.|||:||||.|||||||||||||||||||||||||||:||||::||.|
RBAM_007520__    201 RDVMFEEEPLKELAKDGELAVYRHYGFWTAIDTYKNLLEINKMWDRGQHV    250

BSNT_01243___    251 WKVW    254
                     ||||
RBAM_007520__    251 WKVW    254


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