Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01243 and RBAM_007520

See Amino acid alignment / Visit BSNT_01243 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:54
# Commandline: needle
#    -asequence dna-align/BSNT_01243___yfnH.1.9828.seq
#    -bsequence dna-align/RBAM_007520___yfnH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01243___yfnH-RBAM_007520___yfnH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01243___yfnH-RBAM_007520___yfnH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01243___yfnH
# 2: RBAM_007520___yfnH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 769
# Identity:     624/769 (81.1%)
# Similarity:   624/769 (81.1%)
# Gaps:           8/769 ( 1.0%)
# Score: 2492.0
# 
#
#=======================================

BSNT_01243___      1 ATGAAAGCGGTCATTCTCTGCGGCGGAAAAGGAACGAGAATGAGTGAAGT     50
                     ||||||||.|||||||||||||||||||||||||||||||||||.|||.|
RBAM_007520__      1 ATGAAAGCAGTCATTCTCTGCGGCGGAAAAGGAACGAGAATGAGCGAAAT     50

BSNT_01243___     51 CACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTC    100
                     |||.|||||...|||.||||||||||||||||||||||||||||||||||
RBAM_007520__     51 CACCAATGAACGTCCCAAACCGCTCGCCATGATAGGCGGCAAACCGATTC    100

BSNT_01243___    101 TATGGCATATTATGAAAATTTATCAGTACTACGGAGTAAACGAGTTTATT    150
                     |||||||||||||||||.|.|||||.|||||.||.||.|||||.|||||.
RBAM_007520__    101 TATGGCATATTATGAAACTCTATCAATACTATGGCGTGAACGAATTTATC    150

BSNT_01243___    151 CTGCTTTTGGGCTATAAAGGAGAAAAAATCAAGGAATACTTTC-TCGACT    199
                     ||||||.|.||.|..||||||||.|..||.|||||||| |||| |.||.|
RBAM_007520__    151 CTGCTTCTTGGTTTCAAAGGAGAGATGATTAAGGAATA-TTTCTTAGATT    199

BSNT_01243___    200 ATGAATGGAAGCACAACAGCCTGACACTCGACAGCTCTACGGGAGAGGTA    249
                     ||||.||||||.|..|||||.||||.||.|||||||||||.|||||..|.
RBAM_007520__    200 ATGACTGGAAGAATCACAGCATGACGCTGGACAGCTCTACCGGAGAATTG    249

BSNT_01243___    250 CAGATGCTGGGGCAGCCTGAAACGTGGAAAATTACGTTTTTGGAGACTGG    299
                     |.|||..||||..|..|.||..||||||||||.||.|||||.||.||.||
RBAM_007520__    250 CGGATATTGGGAAAATCCGAGCCGTGGAAAATCACTTTTTTAGACACGGG    299

BSNT_01243___    300 GGAAGATACGCTGACAGCCGGAAGAATCTTGCAGGCGAAAGACTAT-ATC    348
                     ||||.|.||||.||||||.||..|..|.||.||||||||.||| || |||
RBAM_007520__    300 GGAACACACGCAGACAGCGGGGCGGCTTTTACAGGCGAAGGAC-ATCATC    348

BSNT_01243___    349 GGTGATGAAACATTTCTGCTTACCTATGGGGACGGGCTGGCCAATATCAA    398
                     |||||||||||.|||||..|.||.||.||||||||.||||||||.|||||
RBAM_007520__    349 GGTGATGAAACCTTTCTTATGACGTACGGGGACGGACTGGCCAACATCAA    398

BSNT_01243___    399 TCTTTTCCATCTCATCAGCTATCATCAGACAAAAGGTGCTGCCGCGACTG    448
                     .||.||.|||||.||||||||||||||..|||||||.|||||.|||||.|
RBAM_007520__    399 CCTGTTTCATCTGATCAGCTATCATCAATCAAAAGGGGCTGCGGCGACCG    448

BSNT_01243___    449 TCACCGGCATTGACAAAG-TCTCGCAGTTTGGCACCTTGACGGTTGAGGA    497
                     |||||||.||.|| |||| .||||||.||.||.||..||||||||||.||
RBAM_007520__    449 TCACCGGTATAGA-AAAGACCTCGCAATTCGGAACGCTGACGGTTGAAGA    497

BSNT_01243___    498 CGGCATGGCGAAAACATTTTCTGAGAAGACATCAAGTGACGGAATCATCA    547
                     |||.||||||||||..||||||||.||.||.|||||||||||.|||||||
RBAM_007520__    498 CGGTATGGCGAAAAGCTTTTCTGAAAAAACCTCAAGTGACGGCATCATCA    547

BSNT_01243___    548 ACGGCGGATTCTTCGTTCTCAGTCCAAAGGTTTTCGATTATTTGCCGAAG    597
                     ||||||||||.|||||.|||||.||.|||||.||.||||||.|||||||.
RBAM_007520__    548 ACGGCGGATTTTTCGTGCTCAGCCCGAAGGTATTTGATTATCTGCCGAAA    597

BSNT_01243___    598 GAC-GGAAACACGATGTTCGAAGATGAACCGCTGAAGAACCTTGCCAAAG    646
                     ||| ||.|...| |||||.|||||.||||||||||||.|.||.||.||||
RBAM_007520__    598 GACAGGGATGTC-ATGTTTGAAGAAGAACCGCTGAAGGAGCTGGCGAAAG    646

BSNT_01243___    647 ACGGGGAGCTTGCTGTGTACCGCCATTACGGATTTTGGACGGCCATTGAT    696
                     ||||.||..|.||.||.|||||.||||||||.||.||||||||.||.|||
RBAM_007520__    647 ACGGCGAATTGGCGGTATACCGGCATTACGGTTTCTGGACGGCGATCGAT    696

BSNT_01243___    697 ACGTATAAAAATCTCTTAGAAGTCAACAAAATGTGGAATCAAGGACAACA    746
                     |||||||||||.||..|.|||.|||||||.||||||.|.|..||||||||
RBAM_007520__    697 ACGTATAAAAACCTGCTGGAAATCAACAAGATGTGGGACCGGGGACAACA    746

BSNT_01243___    747 AGTATGGAAGGTATGGTGA    765
                     .||||||||||||||||||
RBAM_007520__    747 TGTATGGAAGGTATGGTGA    765


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