Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01175 and RBAM_007270
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:53
# Commandline: needle
# -asequence pep-align/BSNT_01175___yesJ.1.9828.seq
# -bsequence pep-align/RBAM_007270___yesJ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01175___yesJ-RBAM_007270___yesJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01175___yesJ-RBAM_007270___yesJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01175___yesJ
# 2: RBAM_007270___yesJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 180
# Identity: 106/180 (58.9%)
# Similarity: 137/180 (76.1%)
# Gaps: 3/180 ( 1.7%)
# Score: 565.0
#
#
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BSNT_01175___ 1 MSAFKIENETIADGFYACPAVYEDAESITGLLVRTAEWLRDRGSNQWSGL 50
|:.|.|..|| |..|....|..:||:.:..|||:.||||||:||||||||
RBAM_007270__ 1 MTPFTITEET-AGAFRVTSARKDDAKEVMDLLVQAAEWLRDKGSNQWSGL 49
BSNT_01175___ 51 LKGQDIHDITGSIEKGHVFVFKKDEELAAVVMLLPEPSEWDRTLWGDDGH 100
|:|:|.|::..:|.:|:||:|:::||||.|||||||.|.|||.||||:||
RBAM_007270__ 50 LEGEDTHNMREAIAQGYVFLFRQNEELAGVVMLLPEASGWDRRLWGDEGH 99
BSNT_01175___ 101 EESIYLHRLAVSRRFAGQGLGARVLQWAETGIHFPEKTRIRLDCVADSDA 150
|||:||||||::|||||.|||..::.|||||:..|.||:||||||:::.|
RBAM_007270__ 100 EESVYLHRLAINRRFAGVGLGRTIMTWAETGVSCPGKTKIRLDCVSENKA 149
BSNT_01175___ 151 LHSFYRRMGYEFMGADASGYHLFEKEITAE 180
|.|||..||||..| .|.|||||||:::.
RBAM_007270__ 150 LQSFYSGMGYESKG-PAPGYHLFEKKVSK- 177
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