Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01165 and RBAM_007230

See DNA alignment / Visit BSNT_01165 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:52
# Commandline: needle
#    -asequence pep-align/BSNT_01165___yeeI.1.9828.seq
#    -bsequence pep-align/RBAM_007230___yeeI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01165___yeeI-RBAM_007230___yeeI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01165___yeeI-RBAM_007230___yeeI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01165___yeeI
# 2: RBAM_007230___yeeI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 239
# Identity:     232/239 (97.1%)
# Similarity:   236/239 (98.7%)
# Gaps:           0/239 ( 0.0%)
# Score: 1179.0
# 
#
#=======================================

BSNT_01165___      1 MGRKWNNIKEKKASKDANTSRIYAKFGREIYVAAKQGEPDPESNQALKVV     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_007230__      1 MGRKWNNIKEKKASKDANTSRIYAKFGREIYVAAKQGEPDPESNQALKVV     50

BSNT_01165___     51 LERAKTYSVPKNIIERAIEKAKGGAEENYDELRYEGFGPNGSMIIVDALT    100
                     ||||||||||||||||||||||||||||:|||||||||||||||||||||
RBAM_007230__     51 LERAKTYSVPKNIIERAIEKAKGGAEENFDELRYEGFGPNGSMIIVDALT    100

BSNT_01165___    101 NNVNRTAPEVRAAFGKNGGNMGVSGSVAYMFDATAVIGVEGKTADEALEI    150
                     |||||||||||||||||||||||||||||||||||||||||||||||||:
RBAM_007230__    101 NNVNRTAPEVRAAFGKNGGNMGVSGSVAYMFDATAVIGVEGKTADEALEL    150

BSNT_01165___    151 LMEADVDVRDILEEDDSVIVYAEPDQFHAVQEAFKNAGVEEFTVAELTML    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_007230__    151 LMEADVDVRDILEEDDSVIVYAEPDQFHAVQEAFKNAGVEEFTVAELTML    200

BSNT_01165___    201 AQSEVTLPDDAKEQFEKLIDALEDLEDVQQVYHNVDLGE    239
                     ||:||.||:|||.|||||||.||||||||||||||||||
RBAM_007230__    201 AQNEVELPEDAKAQFEKLIDVLEDLEDVQQVYHNVDLGE    239


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