Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01165 and RBAM_007230

See Amino acid alignment / Visit BSNT_01165 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:52
# Commandline: needle
#    -asequence dna-align/BSNT_01165___yeeI.1.9828.seq
#    -bsequence dna-align/RBAM_007230___yeeI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01165___yeeI-RBAM_007230___yeeI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01165___yeeI-RBAM_007230___yeeI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01165___yeeI
# 2: RBAM_007230___yeeI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 720
# Identity:     613/720 (85.1%)
# Similarity:   613/720 (85.1%)
# Gaps:           0/720 ( 0.0%)
# Score: 2637.0
# 
#
#=======================================

BSNT_01165___      1 ATGGGCCGTAAGTGGAACAATATTAAAGAGAAGAAGGCGTCTAAGGACGC     50
                     |||||||||||||||||||||||||||||.|||||.||.||.||||||||
RBAM_007230__      1 ATGGGCCGTAAGTGGAACAATATTAAAGAAAAGAAAGCATCAAAGGACGC     50

BSNT_01165___     51 AAATACGAGTCGGATTTATGCGAAGTTTGGCCGTGAGATTTATGTGGCGG    100
                     |||||||||.||||||||.||||||||.||||||||||||||||||||||
RBAM_007230__     51 AAATACGAGCCGGATTTACGCGAAGTTCGGCCGTGAGATTTATGTGGCGG    100

BSNT_01165___    101 CGAAACAGGGCGAGCCTGATCCGGAATCCAACCAGGCGCTGAAGGTTGTG    150
                     |.|||||.||||||||.|||||||||||.|||||||||.|.||.||.|||
RBAM_007230__    101 CAAAACAAGGCGAGCCAGATCCGGAATCGAACCAGGCGTTAAAAGTGGTG    150

BSNT_01165___    151 CTTGAGCGTGCGAAGACTTACAGCGTGCCGAAAAACATCATTGAACGTGC    200
                     ||||||||.||||||||.|||||.|||||||||||.||.|||||.|||||
RBAM_007230__    151 CTTGAGCGCGCGAAGACGTACAGTGTGCCGAAAAATATTATTGAGCGTGC    200

BSNT_01165___    201 GATCGAGAAGGCGAAGGGCGGAGCGGAAGAGAATTACGATGAGCTTCGTT    250
                     |||.||.||||||||.|||||.|||||.|||||.|..||.|||||.||||
RBAM_007230__    201 GATTGAAAAGGCGAAAGGCGGCGCGGAGGAGAACTTTGACGAGCTGCGTT    250

BSNT_01165___    251 ATGAGGGCTTCGGGCCGAACGGATCAATGATTATCGTTGATGCGCTGACG    300
                     |.||.||.||||||||||||||.||||||||.||||||||||||.|.|||
RBAM_007230__    251 ACGAAGGTTTCGGGCCGAACGGTTCAATGATCATCGTTGATGCGTTAACG    300

BSNT_01165___    301 AATAATGTAAACCGTACGGCGCCGGAAGTGCGTGCGGCGTTCGGGAAAAA    350
                     ||||||||||||||.||||||||.||||||||.||.||.|||||||||||
RBAM_007230__    301 AATAATGTAAACCGCACGGCGCCTGAAGTGCGCGCCGCATTCGGGAAAAA    350

BSNT_01165___    351 CGGCGGAAACATGGGTGTGAGCGGATCTGTTGCTTACATGTTTGACGCGA    400
                     |||||||||.||||||||||||||.|||||.|||||||||||.||.||||
RBAM_007230__    351 CGGCGGAAATATGGGTGTGAGCGGGTCTGTCGCTTACATGTTCGATGCGA    400

BSNT_01165___    401 CGGCTGTAATCGGTGTGGAAGGCAAAACGGCTGACGAAGCGCTTGAAATC    450
                     |.||.||.|||||.||.||||||||.|||||.||.||||||||.|||.|.
RBAM_007230__    401 CTGCCGTTATCGGCGTTGAAGGCAAGACGGCGGATGAAGCGCTGGAATTG    450

BSNT_01165___    451 CTGATGGAAGCGGATGTTGATGTACGTGACATTTTAGAAGAGGATGACAG    500
                     |||||||||||.|||||.||.||.||.||.||||||||||||||||||||
RBAM_007230__    451 CTGATGGAAGCTGATGTGGACGTGCGCGATATTTTAGAAGAGGATGACAG    500

BSNT_01165___    501 CGTGATCGTATATGCTGAGCCTGATCAATTCCATGCGGTGCAAGAGGCGT    550
                     .||.|||||||||||.|||||||||||||||||||||||.||.|||||.|
RBAM_007230__    501 TGTTATCGTATATGCCGAGCCTGATCAATTCCATGCGGTACAGGAGGCAT    550

BSNT_01165___    551 TTAAAAACGCGGGCGTTGAGGAATTTACAGTAGCGGAGCTGACAATGCTT    600
                     |.|||||.||.||||||||.||.||.||.||.|||||||||||.||||||
RBAM_007230__    551 TCAAAAATGCCGGCGTTGAAGAGTTCACGGTTGCGGAGCTGACGATGCTT    600

BSNT_01165___    601 GCGCAAAGTGAAGTAACGCTTCCGGATGATGCAAAGGAACAGTTTGAAAA    650
                     |||||||.||||||...|||||||||.|||||.||.|..||.||||||||
RBAM_007230__    601 GCGCAAAATGAAGTCGAGCTTCCGGAAGATGCGAAAGCTCAATTTGAAAA    650

BSNT_01165___    651 ATTGATTGATGCATTAGAAGATTTGGAAGATGTTCAGCAGGTATATCATA    700
                     ..||||.||||...|.|||||..|||||||.||.||||||||.|||||.|
RBAM_007230__    651 GCTGATCGATGTGCTGGAAGACCTGGAAGACGTACAGCAGGTTTATCACA    700

BSNT_01165___    701 ACGTTGATTTAGGTGAGTAA    720
                     |.||.||||||||.||.|||
RBAM_007230__    701 ATGTAGATTTAGGCGAATAA    720


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