Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01165 and RBAM_007230
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:52
# Commandline: needle
# -asequence dna-align/BSNT_01165___yeeI.1.9828.seq
# -bsequence dna-align/RBAM_007230___yeeI.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01165___yeeI-RBAM_007230___yeeI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01165___yeeI-RBAM_007230___yeeI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01165___yeeI
# 2: RBAM_007230___yeeI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 720
# Identity: 613/720 (85.1%)
# Similarity: 613/720 (85.1%)
# Gaps: 0/720 ( 0.0%)
# Score: 2637.0
#
#
#=======================================
BSNT_01165___ 1 ATGGGCCGTAAGTGGAACAATATTAAAGAGAAGAAGGCGTCTAAGGACGC 50
|||||||||||||||||||||||||||||.|||||.||.||.||||||||
RBAM_007230__ 1 ATGGGCCGTAAGTGGAACAATATTAAAGAAAAGAAAGCATCAAAGGACGC 50
BSNT_01165___ 51 AAATACGAGTCGGATTTATGCGAAGTTTGGCCGTGAGATTTATGTGGCGG 100
|||||||||.||||||||.||||||||.||||||||||||||||||||||
RBAM_007230__ 51 AAATACGAGCCGGATTTACGCGAAGTTCGGCCGTGAGATTTATGTGGCGG 100
BSNT_01165___ 101 CGAAACAGGGCGAGCCTGATCCGGAATCCAACCAGGCGCTGAAGGTTGTG 150
|.|||||.||||||||.|||||||||||.|||||||||.|.||.||.|||
RBAM_007230__ 101 CAAAACAAGGCGAGCCAGATCCGGAATCGAACCAGGCGTTAAAAGTGGTG 150
BSNT_01165___ 151 CTTGAGCGTGCGAAGACTTACAGCGTGCCGAAAAACATCATTGAACGTGC 200
||||||||.||||||||.|||||.|||||||||||.||.|||||.|||||
RBAM_007230__ 151 CTTGAGCGCGCGAAGACGTACAGTGTGCCGAAAAATATTATTGAGCGTGC 200
BSNT_01165___ 201 GATCGAGAAGGCGAAGGGCGGAGCGGAAGAGAATTACGATGAGCTTCGTT 250
|||.||.||||||||.|||||.|||||.|||||.|..||.|||||.||||
RBAM_007230__ 201 GATTGAAAAGGCGAAAGGCGGCGCGGAGGAGAACTTTGACGAGCTGCGTT 250
BSNT_01165___ 251 ATGAGGGCTTCGGGCCGAACGGATCAATGATTATCGTTGATGCGCTGACG 300
|.||.||.||||||||||||||.||||||||.||||||||||||.|.|||
RBAM_007230__ 251 ACGAAGGTTTCGGGCCGAACGGTTCAATGATCATCGTTGATGCGTTAACG 300
BSNT_01165___ 301 AATAATGTAAACCGTACGGCGCCGGAAGTGCGTGCGGCGTTCGGGAAAAA 350
||||||||||||||.||||||||.||||||||.||.||.|||||||||||
RBAM_007230__ 301 AATAATGTAAACCGCACGGCGCCTGAAGTGCGCGCCGCATTCGGGAAAAA 350
BSNT_01165___ 351 CGGCGGAAACATGGGTGTGAGCGGATCTGTTGCTTACATGTTTGACGCGA 400
|||||||||.||||||||||||||.|||||.|||||||||||.||.||||
RBAM_007230__ 351 CGGCGGAAATATGGGTGTGAGCGGGTCTGTCGCTTACATGTTCGATGCGA 400
BSNT_01165___ 401 CGGCTGTAATCGGTGTGGAAGGCAAAACGGCTGACGAAGCGCTTGAAATC 450
|.||.||.|||||.||.||||||||.|||||.||.||||||||.|||.|.
RBAM_007230__ 401 CTGCCGTTATCGGCGTTGAAGGCAAGACGGCGGATGAAGCGCTGGAATTG 450
BSNT_01165___ 451 CTGATGGAAGCGGATGTTGATGTACGTGACATTTTAGAAGAGGATGACAG 500
|||||||||||.|||||.||.||.||.||.||||||||||||||||||||
RBAM_007230__ 451 CTGATGGAAGCTGATGTGGACGTGCGCGATATTTTAGAAGAGGATGACAG 500
BSNT_01165___ 501 CGTGATCGTATATGCTGAGCCTGATCAATTCCATGCGGTGCAAGAGGCGT 550
.||.|||||||||||.|||||||||||||||||||||||.||.|||||.|
RBAM_007230__ 501 TGTTATCGTATATGCCGAGCCTGATCAATTCCATGCGGTACAGGAGGCAT 550
BSNT_01165___ 551 TTAAAAACGCGGGCGTTGAGGAATTTACAGTAGCGGAGCTGACAATGCTT 600
|.|||||.||.||||||||.||.||.||.||.|||||||||||.||||||
RBAM_007230__ 551 TCAAAAATGCCGGCGTTGAAGAGTTCACGGTTGCGGAGCTGACGATGCTT 600
BSNT_01165___ 601 GCGCAAAGTGAAGTAACGCTTCCGGATGATGCAAAGGAACAGTTTGAAAA 650
|||||||.||||||...|||||||||.|||||.||.|..||.||||||||
RBAM_007230__ 601 GCGCAAAATGAAGTCGAGCTTCCGGAAGATGCGAAAGCTCAATTTGAAAA 650
BSNT_01165___ 651 ATTGATTGATGCATTAGAAGATTTGGAAGATGTTCAGCAGGTATATCATA 700
..||||.||||...|.|||||..|||||||.||.||||||||.|||||.|
RBAM_007230__ 651 GCTGATCGATGTGCTGGAAGACCTGGAAGACGTACAGCAGGTTTATCACA 700
BSNT_01165___ 701 ACGTTGATTTAGGTGAGTAA 720
|.||.||||||||.||.|||
RBAM_007230__ 701 ATGTAGATTTAGGCGAATAA 720
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