Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01158 and RBAM_007190

See DNA alignment / Visit BSNT_01158 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:52
# Commandline: needle
#    -asequence pep-align/BSNT_01158.1.9828.seq
#    -bsequence pep-align/RBAM_007190.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01158-RBAM_007190.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01158-RBAM_007190.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01158
# 2: RBAM_007190
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 168
# Identity:      92/168 (54.8%)
# Similarity:   123/168 (73.2%)
# Gaps:          12/168 ( 7.1%)
# Score: 512.0
# 
#
#=======================================

BSNT_01158         1 METQKMGELYQKIAEHLNEMIPSQWEKIVLYAEILDDSADIYFYFTTPNN     50
                     ||.:|||||||:|||.:||:|||:||:::|||||||||::::|||.|| .
RBAM_007190        1 MEIEKMGELYQQIAEGINEIIPSEWERVILYAEILDDSSEVFFYFNTP-Y     49

BSNT_01158        51 NSDYLFSHYIPEHFDVSEEIYDQLLIELQELFEELKEEFKLGNQDIWTNL    100
                     |.|.::||.||||:.||||||::||.:|.:|||||::|||..||||||||
RBAM_007190       50 NEDLIYSHNIPEHYHVSEEIYEELLFDLHDLFEELRDEFKENNQDIWTNL     99

BSNT_01158       101 TLKLENTGKFSIDYNYDDVLSSELDDLQRRDVWKYQNLGILPKDEDDKEF    150
                     ||.|..:|:|||||||:||:.|.....||:.:|.|:|:||.||.:..|.|
RBAM_007190      100 TLSLGISGEFSIDYNYEDVIQSPYTITQRQTIWTYKNVGIYPKSKPLKSF    149

BSNT_01158       151 VINYFGL-----------    157
                     :..|...           
RBAM_007190      150 LKQYLSSQKLISHSFFWR    167


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