Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01158 and RBAM_007190
See
DNA alignment /
Visit
BSNT_01158 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:52
# Commandline: needle
# -asequence pep-align/BSNT_01158.1.9828.seq
# -bsequence pep-align/RBAM_007190.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01158-RBAM_007190.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01158-RBAM_007190.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01158
# 2: RBAM_007190
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 168
# Identity: 92/168 (54.8%)
# Similarity: 123/168 (73.2%)
# Gaps: 12/168 ( 7.1%)
# Score: 512.0
#
#
#=======================================
BSNT_01158 1 METQKMGELYQKIAEHLNEMIPSQWEKIVLYAEILDDSADIYFYFTTPNN 50
||.:|||||||:|||.:||:|||:||:::|||||||||::::|||.|| .
RBAM_007190 1 MEIEKMGELYQQIAEGINEIIPSEWERVILYAEILDDSSEVFFYFNTP-Y 49
BSNT_01158 51 NSDYLFSHYIPEHFDVSEEIYDQLLIELQELFEELKEEFKLGNQDIWTNL 100
|.|.::||.||||:.||||||::||.:|.:|||||::|||..||||||||
RBAM_007190 50 NEDLIYSHNIPEHYHVSEEIYEELLFDLHDLFEELRDEFKENNQDIWTNL 99
BSNT_01158 101 TLKLENTGKFSIDYNYDDVLSSELDDLQRRDVWKYQNLGILPKDEDDKEF 150
||.|..:|:|||||||:||:.|.....||:.:|.|:|:||.||.:..|.|
RBAM_007190 100 TLSLGISGEFSIDYNYEDVIQSPYTITQRQTIWTYKNVGIYPKSKPLKSF 149
BSNT_01158 151 VINYFGL----------- 157
:..|...
RBAM_007190 150 LKQYLSSQKLISHSFFWR 167
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.