Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01158 and RBAM_007190
See
Amino acid alignment /
Visit
BSNT_01158 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:52
# Commandline: needle
# -asequence dna-align/BSNT_01158.1.9828.seq
# -bsequence dna-align/RBAM_007190.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01158-RBAM_007190.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01158-RBAM_007190.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01158
# 2: RBAM_007190
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 533
# Identity: 345/533 (64.7%)
# Similarity: 345/533 (64.7%)
# Gaps: 88/533 (16.5%)
# Score: 1097.5
#
#
#=======================================
BSNT_01158 1 ATGGAAACTCAAAAAATGGGTGAACTATATCAAAAGATTGCTGAA--CAT 48
|||||||...||||||||||||||.||||||||.||||.||.||| ||
RBAM_007190 1 ATGGAAATAGAAAAAATGGGTGAATTATATCAACAGATAGCAGAAGGCA- 49
BSNT_01158 49 CTAAATGAAATGATTCCATCTCAATGGGAAAAGA-TCGTTTTATATGCTG 97
|.||.|||||.|||||.|||.|||||| ||||| |..||.|.|||||.|
RBAM_007190 50 -TTAACGAAATCATTCCTTCTGAATGGG-AAAGAGTTATTCTTTATGCGG 97
BSNT_01158 98 AAATACTTGATGACTCAGCGGATATATACTTTTATTTTACAACACCAAAT 147
||||||||||.||.|||.|.||..|.|.|||||||||.|..||.|||.||
RBAM_007190 98 AAATACTTGACGATTCATCTGAGGTTTTCTTTTATTTCAATACTCCATAT 147
BSNT_01158 148 AAT-AACAGTGATTATTTATTTTCTCATTATATACCTGAACACTTTGATG 196
||| || ||||...|||.|||||||.||||.||||||||||.|.|||
RBAM_007190 148 AATGAA----GATTTGATATATTCTCATAATATCCCTGAACACTATCATG 193
BSNT_01158 197 TGAGCGAAGAGATTTACGATCAACTACTAATTGAACTT-CAAGAGCTATT 245
|.||.||.||||||||.||..|.||||||.||| |||| ||.||..||||
RBAM_007190 194 TCAGTGAGGAGATTTATGAGGAGCTACTATTTG-ACTTGCATGACTTATT 242
BSNT_01158 246 TGAAGAACTAAAAGAGGAATTTAAACTAGGCAACCAAGATATTTGGACTA 295
.||.|||.||..|||.|||||||||..|..|||.||||||||.|||||||
RBAM_007190 243 CGAGGAATTACGAGATGAATTTAAAGAAAACAATCAAGATATATGGACTA 292
BSNT_01158 296 ATCTCACTTTAAAATTA-------GAAAACACCGGAAAGTTTTCAATTGA 338
||||.|| |.||| ||.| |.||||.|.|||||.||.||
RBAM_007190 293 ATCTAAC-----ACTTAGTCTGGGGATA--AGCGGAGAATTTTCGATAGA 335
BSNT_01158 339 TTATAATTATGATGATGTTTTATC---CTC--TGAACTTGATGACCTTCA 383
||||||||||||.||.|||.| || ||| |..|| .||.|| |||
RBAM_007190 336 TTATAATTATGAAGACGTTAT-TCAATCTCCATATAC--CATCAC--TCA 380
BSNT_01158 384 AAGACGAGATGTTTGGAAATATCAAAATTTAGGGATATTGCCTAAAGATG 433
|||||.|....|.||||..|||.|||||.||||.||.|..||||| |
RBAM_007190 381 AAGACAAACAATCTGGACTTATAAAAATGTAGGAATTTATCCTAA----G 426
BSNT_01158 434 AGGACGATAA------AGAA---TTTGTAATAAACTA-CTTCGGTCTATA 473
|| ||| |.|| |||.|||.|.|.|| ||..|.|||..|
RBAM_007190 427 AG-----TAAACCTTTAAAATCCTTTTTAAAACAATATCTAAGTTCTCAA 471
BSNT_01158 474 A-------------------------------- 474
|
RBAM_007190 472 AAATTGATATCCCACTCCTTTTTCTGGAGGTAA 504
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.