Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04127 and RBAM_007150
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:30
# Commandline: needle
# -asequence pep-align/BSNT_04127.1.9828.seq
# -bsequence pep-align/RBAM_007150.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04127-RBAM_007150.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04127-RBAM_007150.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04127
# 2: RBAM_007150
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 517
# Identity: 104/517 (20.1%)
# Similarity: 180/517 (34.8%)
# Gaps: 187/517 (36.2%)
# Score: 224.5
#
#
#=======================================
BSNT_04127 1 MSKEKKTIEELVGETIVPVEEQPYELPENWIWVKLLNGYAVCLDKYRKPV 50
RBAM_007150 0 -------------------------------------------------- 0
BSNT_04127 51 NAEERAKRVGNIPYYGATGQVGWIDDYLTDEELV------LLG----EDG 90
.:...||:|:. ..|.||..| ||| ::.
RBAM_007150 1 -MKSNYKRIGDC-------------IRLVDERNVNLNVTTLLGLSITKEF 36
BSNT_04127 91 VPFL-----EPFKNKAYIIREKAWVNNHAHILRSN--------------- 120
:|.: ..|||.. |||:|.:..:...:.|..
RBAM_007150 37 IPSVANTIGTDFKNYK-IIRKKQFACSTMQVRRDKKMPVALLQDYDEAII 85
BSNT_04127 121 ---------FGSEGNL--FLLHYLNQFNFNG----YVSGTTRLKLTQKKM 155
..:|..| :|:.:.::..|:. |..|..|..:..:..
RBAM_007150 86 SAAYPVFEVVDTEMILPEYLMMWFSRSEFDREACFYAIGGVRGSIEWEDF 135
BSNT_04127 156 AIIPVPLPPLNEQKRIAEKVERLLSKIEEAKQLIEEAKETFELRRASIIR 205
..:.:|:|.::|||.|..|.:.||.:|:.....|::.:|| ::
RBAM_007150 136 CNMQLPVPSIDEQKEIINKHKILLDRIKVNNLFIQKLEET--------VQ 177
BSNT_04127 206 TILKE---------------ELSNGK----------LPTGWRNIKVKDLF 230
||.|: :.|.|| :|.||......|:.
RBAM_007150 178 TIYKQWFIDFEFPNQLGNPYKSSGGKMKFNPILNTEIPKGWEVKSFTDVV 227
BSNT_04127 231 TIFGGGTPSKAKEEYWNGRIPWISAKDMKTTFIS-KTMDYITEEGLNNSS 279
.:.|||||....:.||||.||:.:..|:..::.. :|...:::.||.|||
RBAM_007150 228 KVGGGGTPDTTIDTYWNGGIPFFTPGDVSESYYCLETEKSVSKLGLRNSS 277
BSNT_04127 280 AKLAKRGSVAMVVRSGILQRTLPVAFLLSECTVNQDLKVFDSGDELINKY 329
.||..:.:|.:..|..: ..:|...:|.|:||..... .|| |:|
RBAM_007150 278 TKLYPKNTVFVTARGTV----GAIALAGTEMTMNQSCYAL-MGD---NQY 319
BSNT_04127 330 FLWYVK-GNERNLLHNYSKSGTTVNSIEFEKFKSHEILLPPMDVLKQKID 378
::..:. ...|:| ....||...|::..:.|....::.||.|
RBAM_007150 320 YIHQLTIATIRSL--KKQASGAVFNALIVKDFAEQNVVHPPKD------- 360
BSNT_04127 379 KIENVIEKEKSANVMLNLANSI------DELKSSILSKAFRGELGTNDPS 422
|||..: |::..|.|:| ::|.||.: |....:|.| :
RBAM_007150 361 -IENSFQ-----NIVRGLYNAIYLKVELNKLLSSTV-KLLLSKLAT---T 400
BSNT_04127 423 EENAVELLKEVLQEQVK 439
....:|:|
RBAM_007150 401 RGKNIEIL--------- 408
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