Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01152 and RBAM_007130
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:52
# Commandline: needle
# -asequence pep-align/BSNT_01152.1.9828.seq
# -bsequence pep-align/RBAM_007130___yefA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01152-RBAM_007130___yefA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01152-RBAM_007130___yefA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01152
# 2: RBAM_007130___yefA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 508
# Identity: 232/508 (45.7%)
# Similarity: 249/508 (49.0%)
# Gaps: 214/508 (42.1%)
# Score: 1152.5
#
#
#=======================================
BSNT_01152 1 MKMKPPVEKNEYYDVTFEDLTHEGAGVAKVQGFPIFVPNALPEEKAQIKV 50
||||||:|||||||||||||||:|||||||||||||||||||||||||||
RBAM_007130__ 1 MKMKPPIEKNEYYDVTFEDLTHDGAGVAKVQGFPIFVPNALPEEKAQIKV 50
BSNT_01152 51 TRVKKGFAFGRLIELKEESPHRTDAPCPIYKQCGGCQLQHMTYEGQLLFK 100
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_007130__ 51 TRVKKGFAFGRLIELKEESPHRTDAPCPIYKQCGGCQLQHMTYEGQLLFK 100
BSNT_01152 101 QKQVKDVLERIGKLDLSNVTVHPTLGMEDPWNYRNKAQVPVGEREGGLVA 150
||||||||||||||:||.|.||||||||||||||||||||||||||||||
RBAM_007130__ 101 QKQVKDVLERIGKLNLSKVIVHPTLGMEDPWNYRNKAQVPVGEREGGLVA 150
BSNT_01152 151 GFYQQRSHDIIEMSACLIQQSKNDEAVQAVKDICAKYGVKAYNEERHKGW 200
|||||||||||:||||||||||||||||||||||..||||||||||||||
RBAM_007130__ 151 GFYQQRSHDIIDMSACLIQQSKNDEAVQAVKDICTSYGVKAYNEERHKGW 200
BSNT_01152 201 LRHIMVRYGVVTGEMMIVFITRTNDFPHKRRSSKTSQRNSRTSNPSCKTS 250
|||||||||||||||||||||||:|||||.:
RBAM_007130__ 201 LRHIMVRYGVVTGEMMIVFITRTSDFPHKAK------------------- 231
BSNT_01152 251 TRTKQTSSSGTKQTSSGAKNTSTTSSETSNSPFPPDRSIRSTRSRQRCST 300
..|...:.||..:||....:..:.:.
RBAM_007130__ 232 ------------------------IIEDITAQFPHVKSIVQNINPNKTNV 257
BSNT_01152 301 TKRLSTLSFKGKKPSLTPTAASARFLSSWRS----RRKKCTV-------- 338
.....|....|:: .:.......:|..|.|| ..::..|
RBAM_007130__ 258 IFGNETNVIWGEE-YIYDLIGDVKFAISARSFYQVNPEQTKVLYDKALEY 306
BSNT_01152 338 -------------------------------------------------- 338
RBAM_007130__ 307 AELQGEETVIDAYCGIGTISLFLAKQAKKVYGVEIVPEAIEDAKRNAELN 356
BSNT_01152 338 -------------------------------------------------- 338
RBAM_007130__ 357 GITNAEFAVGEAETVIPKWYKEGITADTLVVDPPRKGCDEALLRTIIDMK 406
BSNT_01152 338 -------------------------------------------------- 338
RBAM_007130__ 407 PKRVVYVSCNPGTLARDLRMLEDGGYQTLEVQPVDMFPHTNHVEVVSQMI 456
BSNT_01152 338 -------- 338
RBAM_007130__ 457 LKNEAGSR 464
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