Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01152 and RBAM_007130
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:52
# Commandline: needle
# -asequence dna-align/BSNT_01152.1.9828.seq
# -bsequence dna-align/RBAM_007130___yefA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01152-RBAM_007130___yefA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01152-RBAM_007130___yefA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01152
# 2: RBAM_007130___yefA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1395
# Identity: 947/1395 (67.9%)
# Similarity: 947/1395 (67.9%)
# Gaps: 378/1395 (27.1%)
# Score: 4445.0
#
#
#=======================================
BSNT_01152 1 ATGAAAATGAAACCCCCAGTAGAAAAAAACGAATACTATGACGTGACATT 50
|||||||||||||||||..||||||||||.|||||||||||.||||||||
RBAM_007130__ 1 ATGAAAATGAAACCCCCGATAGAAAAAAATGAATACTATGATGTGACATT 50
BSNT_01152 51 TGAGGATTTGACCCACGAAGGAGCGGGTGTCGCAAAGGTCCAAGGCTTTC 100
||||||||||||.|||||.||||||||.|||||||||||.||.|||||.|
RBAM_007130__ 51 TGAGGATTTGACGCACGACGGAGCGGGCGTCGCAAAGGTTCAGGGCTTCC 100
BSNT_01152 101 CGATCTTCGTGCCGAACGCCCTGCCGGAGGAAAAAGCCCAAATCAAAGTG 150
|||||||||||||||||||||||||.|||||||||||.||||||||||||
RBAM_007130__ 101 CGATCTTCGTGCCGAACGCCCTGCCTGAGGAAAAAGCGCAAATCAAAGTG 150
BSNT_01152 151 ACACGCGTCAAAAAAGGGTTCGCCTTCGGCCGTCTGATTGAGCTGAAGGA 200
|||||||||||||||||.|||||.||||||||..|||||||.|||||.||
RBAM_007130__ 151 ACACGCGTCAAAAAAGGCTTCGCTTTCGGCCGCTTGATTGAACTGAAAGA 200
BSNT_01152 201 AGAAAGCCCGCATAGAACGGACGCCCCATGCCCGATTTACAAGCAATGCG 250
||||||||||||.||||||||.|||||.||.|||||.|||||||||||||
RBAM_007130__ 201 AGAAAGCCCGCACAGAACGGATGCCCCGTGTCCGATCTACAAGCAATGCG 250
BSNT_01152 251 GAGGCTGTCAGCTTCAGCACATGACCTACGAAGGACAGCTCCTGTTTAAA 300
|||||||.||||||||||||||||||||.|||||.||||||.||||||||
RBAM_007130__ 251 GAGGCTGCCAGCTTCAGCACATGACCTATGAAGGCCAGCTCTTGTTTAAA 300
BSNT_01152 301 CAGAAACAAGTCAAAGACGTCTTAGAACGCATCGGCAAGCTGGACCTTTC 350
|||||||||||||||||||||||||||||.||||||||||||.|||||||
RBAM_007130__ 301 CAGAAACAAGTCAAAGACGTCTTAGAACGGATCGGCAAGCTGAACCTTTC 350
BSNT_01152 351 AAACGTCACCGTGCACCCGACACTCGGCATGGAAGACCCTTGGAACTACA 400
|||.||||.||||||.|||||.|||||||||||||||||.||||||||||
RBAM_007130__ 351 AAAAGTCATCGTGCATCCGACGCTCGGCATGGAAGACCCGTGGAACTACA 400
BSNT_01152 401 GAAACAAAGCACAGGTGCCGGTAGGAGAACGCGAAGGCGGACTCGTCGCC 450
||||||||||.||||||||||||||||||||.||||||||||||||||||
RBAM_007130__ 401 GAAACAAAGCGCAGGTGCCGGTAGGAGAACGGGAAGGCGGACTCGTCGCC 450
BSNT_01152 451 GGATTTTATCAGCAAAGAAGCCATGACATCATCGAAATGAGCGCCTGCCT 500
|||||.|||||||||||||||||||||||||||||.||||||||||||||
RBAM_007130__ 451 GGATTCTATCAGCAAAGAAGCCATGACATCATCGATATGAGCGCCTGCCT 500
BSNT_01152 501 GATCCAGCAATCCAAAAACGATGAAGCCGTCCAAGCCGTCAAAGACATTT 550
|||||||||||||||||||||.||||||||.|||||.|||||||||||||
RBAM_007130__ 501 GATCCAGCAATCCAAAAACGACGAAGCCGTTCAAGCTGTCAAAGACATTT 550
BSNT_01152 551 GCGCCAAATACGGTGTCAAAGCCTACAATGAAGAACGCCACAAAGGCTGG 600
||.||..||||||.||||||||||||||.|||||||||||||||||||||
RBAM_007130__ 551 GCACCTCATACGGCGTCAAAGCCTACAACGAAGAACGCCACAAAGGCTGG 600
BSNT_01152 601 CTCCGCCACATCATGGTCAGATACGGCGTTGTTACGGGCGAAATGATGAT 650
|||||||||||||||||||||||||||||.||.||.||||||||||||||
RBAM_007130__ 601 CTCCGCCACATCATGGTCAGATACGGCGTCGTCACAGGCGAAATGATGAT 650
BSNT_01152 651 CGTCTTCATCACAAGAACGAACGATTTTCCGCATAAA-CGAAGATCATCG 699
||||||||||||||||||.|.||||||.|||||.||| ||||||||||||
RBAM_007130__ 651 CGTCTTCATCACAAGAACAAGCGATTTCCCGCACAAAGCGAAGATCATCG 700
BSNT_01152 700 AAGACATCACAGCGCAATTCCCGCACGTCAAATCCATCGTGCAAAACATC 749
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_007130__ 701 AAGACATCACAGCGCAATTCCCGCACGTCAAATCCATCGTGCAAAACATC 750
BSNT_01152 750 AACCCGAACAAAACAAACGTCATCTTCGGGAACGAAACAAACGTCATCTG 799
||.||.||||||||||||||||||||.|||||||||||||||||||||||
RBAM_007130__ 751 AATCCAAACAAAACAAACGTCATCTTTGGGAACGAAACAAACGTCATCTG 800
BSNT_01152 800 GGGCGAAGAATACATCTACGACCTCATCGGAGACGTCAAATTCGCCATTT 849
||||||||||||||||||.|||||||||||||||||||||||||||||.|
RBAM_007130__ 801 GGGCGAAGAATACATCTATGACCTCATCGGAGACGTCAAATTCGCCATCT 850
BSNT_01152 850 CCGCCAGATCGTTCTATCAGGTCAACCCGGAGCAGACAAAGGTGCTCTAC 899
|||||||||||||||||||||||||||||||.||||||||.|||||||||
RBAM_007130__ 851 CCGCCAGATCGTTCTATCAGGTCAACCCGGAACAGACAAAAGTGCTCTAC 900
BSNT_01152 900 GACAAAGCGCTTGAGTACGCTGAGCTTCAAGGGGAAGAAACCGTCATTGA 949
||||||||||||||||||||.|||||.||||||||||||||||||||.||
RBAM_007130__ 901 GACAAAGCGCTTGAGTACGCGGAGCTGCAAGGGGAAGAAACCGTCATCGA 950
BSNT_01152 950 CGCCTACTGCGGCATCGGCACGATTTCTCTCTTCCTGGCGAAGCAGGCGA 999
||||||||||||||||||.|||||||||||.||.||||||||||||||||
RBAM_007130__ 951 CGCCTACTGCGGCATCGGAACGATTTCTCTATTTCTGGCGAAGCAGGCGA 1000
BSNT_01152 1000 AAAAAGTGTACGGTGTAG-------------------------------- 1017
|.|||||.|||||.||.|
RBAM_007130__ 1001 AGAAAGTATACGGCGTCGAAATCGTGCCGGAAGCCATCGAGGATGCAAAA 1050
BSNT_01152 1017 -------------------------------------------------- 1017
RBAM_007130__ 1051 CGCAACGCTGAGCTGAACGGCATCACAAACGCAGAATTCGCAGTCGGAGA 1100
BSNT_01152 1017 -------------------------------------------------- 1017
RBAM_007130__ 1101 AGCGGAAACCGTCATTCCGAAATGGTATAAAGAAGGTATCACGGCCGACA 1150
BSNT_01152 1017 -------------------------------------------------- 1017
RBAM_007130__ 1151 CCCTCGTCGTCGACCCGCCAAGAAAAGGCTGTGACGAAGCGCTACTGCGG 1200
BSNT_01152 1017 -------------------------------------------------- 1017
RBAM_007130__ 1201 ACAATCATCGACATGAAACCGAAGCGAGTGGTGTACGTGTCCTGCAATCC 1250
BSNT_01152 1017 -------------------------------------------------- 1017
RBAM_007130__ 1251 AGGAACGCTTGCAAGAGATTTGCGGATGCTTGAGGATGGCGGGTATCAGA 1300
BSNT_01152 1017 -------------------------------------------------- 1017
RBAM_007130__ 1301 CGCTCGAAGTGCAGCCTGTGGATATGTTCCCGCATACGAATCATGTGGAG 1350
BSNT_01152 1017 --------------------------------------------- 1017
RBAM_007130__ 1351 GTAGTATCGCAGATGATTTTAAAAAATGAAGCAGGCTCCCGATAA 1395
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