Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_01146 and RBAM_007070

See DNA alignment / Visit BSNT_01146 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:50
# Commandline: needle
#    -asequence pep-align/BSNT_01146___gatC.1.9828.seq
#    -bsequence pep-align/RBAM_007070___gatC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01146___gatC-RBAM_007070___gatC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01146___gatC-RBAM_007070___gatC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01146___gatC
# 2: RBAM_007070___gatC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 96
# Identity:      92/96 (95.8%)
# Similarity:    96/96 (100.0%)
# Gaps:           0/96 ( 0.0%)
# Score: 471.0
# 
#
#=======================================

BSNT_01146___      1 MSRISIEEVKHVAHLARLAITEEEAKMFTEQLDSIISFAEELNEVNTDNV     50
                     |||||||||||||||||||||:|||:|||||||||||||||||||:||||
RBAM_007070__      1 MSRISIEEVKHVAHLARLAITDEEAEMFTEQLDSIISFAEELNEVDTDNV     50

BSNT_01146___     51 EPTTHVLKMKNVMREDEAGKGLPVEDVMKNAPDHKDGYIRVPSILD     96
                     ||||||||||||||||||||||||||||||||||||||:|||||||
RBAM_007070__     51 EPTTHVLKMKNVMREDEAGKGLPVEDVMKNAPDHKDGYVRVPSILD     96


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.