Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_01146 and RBAM_007070

See Amino acid alignment / Visit BSNT_01146 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:50
# Commandline: needle
#    -asequence dna-align/BSNT_01146___gatC.1.9828.seq
#    -bsequence dna-align/RBAM_007070___gatC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01146___gatC-RBAM_007070___gatC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01146___gatC-RBAM_007070___gatC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01146___gatC
# 2: RBAM_007070___gatC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 291
# Identity:     252/291 (86.6%)
# Similarity:   252/291 (86.6%)
# Gaps:           0/291 ( 0.0%)
# Score: 1104.0
# 
#
#=======================================

BSNT_01146___      1 ATGTCACGAATTTCAATAGAAGAAGTAAAGCACGTTGCGCACCTTGCAAG     50
                     ||||||||||||||.|||||||||||||||||.||.||.||..|.||.||
RBAM_007070__      1 ATGTCACGAATTTCTATAGAAGAAGTAAAGCATGTCGCTCATTTGGCGAG     50

BSNT_01146___     51 ACTTGCGATTACTGAAGAAGAAGCAAAAATGTTCACTGAACAGCTCGACA    100
                     |||.||.|||||.||.||||||||..||||||||||.||||||||.||||
RBAM_007070__     51 ACTCGCCATTACGGATGAAGAAGCTGAAATGTTCACAGAACAGCTTGACA    100

BSNT_01146___    101 GTATCATTTCATTTGCCGAGGAGCTTAATGAGGTTAACACAGACAATGTG    150
                     |.|||||.||.||||||||||||||||||||.||..||||.||.||.|||
RBAM_007070__    101 GCATCATCTCGTTTGCCGAGGAGCTTAATGAAGTGGACACGGATAACGTG    150

BSNT_01146___    151 GAGCCTACAACTCACGTGCTGAAAATGAAAAATGTCATGAGAGAAGATGA    200
                     ||.||.|||||.||||||||||||||||||||.||.||||||||||||||
RBAM_007070__    151 GAACCGACAACACACGTGCTGAAAATGAAAAACGTAATGAGAGAAGATGA    200

BSNT_01146___    201 AGCGGGTAAAGGTCTTCCGGTTGAGGATGTCATGAAAAATGCGCCTGACC    250
                     ||||||||||||.||||||||.||||||||||||||||||||.||.||.|
RBAM_007070__    201 AGCGGGTAAAGGCCTTCCGGTCGAGGATGTCATGAAAAATGCTCCCGATC    250

BSNT_01146___    251 ATAAAGACGGCTATATTCGTGTGCCATCAATTCTGGACTAA    291
                     ||||||||||||||.|.|||||||||||.||||||||.|||
RBAM_007070__    251 ATAAAGACGGCTATGTCCGTGTGCCATCTATTCTGGATTAA    291


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.