Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01139 and RBAM_007040
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:50
# Commandline: needle
# -asequence pep-align/BSNT_01139___yerI.1.9828.seq
# -bsequence pep-align/RBAM_007040___yerI.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01139___yerI-RBAM_007040___yerI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01139___yerI-RBAM_007040___yerI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01139___yerI
# 2: RBAM_007040___yerI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 333
# Identity: 260/333 (78.1%)
# Similarity: 300/333 (90.1%)
# Gaps: 2/333 ( 0.6%)
# Score: 1435.5
#
#
#=======================================
BSNT_01139___ 1 MHKDIKKIFEEEQVLAEAAARYGFSKDQVRFLADAENYVYECMKDNQPYI 50
||||||.||||::|||||...|||:|.| |:|||||||||.:|||:|||
RBAM_007040__ 1 MHKDIKAIFEEDKVLAEAGEIYGFTKFQ--FIADAENYVYEIVKDNEPYI 48
BSNT_01139___ 51 LKITHTIRRSSDYMMGEMEWLRHLAIGGISVAKPLPSLNGKDVEAVPDGN 100
|||||||||:.:|::||||||.|||.||:|.|||:|||||||||.||||.
RBAM_007040__ 49 LKITHTIRRTPEYILGEMEWLHHLAKGGLSAAKPIPSLNGKDVEEVPDGK 98
BSNT_01139___ 101 GGSFLLRVYEKAPGQKVDESDWNETLFYELGRYTGSMHSLTKSYKLSNPA 150
||:||:||||||||:||:|||||.||||:||:|||:||.|||||.||:|.
RBAM_007040__ 99 GGAFLVRVYEKAPGRKVEESDWNGTLFYQLGKYTGNMHRLTKSYCLSDPT 148
BSNT_01139___ 151 FKRQEWDEEEQLKLRKYVPEDQIKVFQQADSLMNELRRLPKSQDSYGLVH 200
:||||||||||||||||||.||..||:::|:||.:||||||:.::|||||
RBAM_007040__ 149 YKRQEWDEEEQLKLRKYVPADQHLVFERSDALMEKLRRLPKNPENYGLVH 198
BSNT_01139___ 201 ADLHHGNFNWDHGKITAFDFDDIGYNWFVNDISILLYNVLWYPVVPYDDK 250
|||||||||||:||||||||||||||||||||||||||:|||||:||:||
RBAM_007040__ 199 ADLHHGNFNWDNGKITAFDFDDIGYNWFVNDISILLYNMLWYPVIPYEDK 248
BSNT_01139___ 251 AAFTEEFMTHFMKGYWEENELDPAWLMIIPDFLRLRHMLIYGLLHQMFDL 300
||||.||||||||||.|||:||||||..||||||||||||||||||.|||
RBAM_007040__ 249 AAFTGEFMTHFMKGYREENDLDPAWLEHIPDFLRLRHMLIYGLLHQAFDL 298
BSNT_01139___ 301 NTIGEEEKEMLAGFRRDIENGTPITAFDFSALV 333
|::|:||:|||..|||||||.||||.::|||.|
RBAM_007040__ 299 NSLGDEEREMLKAFRRDIENETPITEYNFSAFV 331
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