Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01139 and RBAM_007040

See DNA alignment / Visit BSNT_01139 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:50
# Commandline: needle
#    -asequence pep-align/BSNT_01139___yerI.1.9828.seq
#    -bsequence pep-align/RBAM_007040___yerI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01139___yerI-RBAM_007040___yerI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01139___yerI-RBAM_007040___yerI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01139___yerI
# 2: RBAM_007040___yerI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 333
# Identity:     260/333 (78.1%)
# Similarity:   300/333 (90.1%)
# Gaps:           2/333 ( 0.6%)
# Score: 1435.5
# 
#
#=======================================

BSNT_01139___      1 MHKDIKKIFEEEQVLAEAAARYGFSKDQVRFLADAENYVYECMKDNQPYI     50
                     ||||||.||||::|||||...|||:|.|  |:|||||||||.:|||:|||
RBAM_007040__      1 MHKDIKAIFEEDKVLAEAGEIYGFTKFQ--FIADAENYVYEIVKDNEPYI     48

BSNT_01139___     51 LKITHTIRRSSDYMMGEMEWLRHLAIGGISVAKPLPSLNGKDVEAVPDGN    100
                     |||||||||:.:|::||||||.|||.||:|.|||:|||||||||.||||.
RBAM_007040__     49 LKITHTIRRTPEYILGEMEWLHHLAKGGLSAAKPIPSLNGKDVEEVPDGK     98

BSNT_01139___    101 GGSFLLRVYEKAPGQKVDESDWNETLFYELGRYTGSMHSLTKSYKLSNPA    150
                     ||:||:||||||||:||:|||||.||||:||:|||:||.|||||.||:|.
RBAM_007040__     99 GGAFLVRVYEKAPGRKVEESDWNGTLFYQLGKYTGNMHRLTKSYCLSDPT    148

BSNT_01139___    151 FKRQEWDEEEQLKLRKYVPEDQIKVFQQADSLMNELRRLPKSQDSYGLVH    200
                     :||||||||||||||||||.||..||:::|:||.:||||||:.::|||||
RBAM_007040__    149 YKRQEWDEEEQLKLRKYVPADQHLVFERSDALMEKLRRLPKNPENYGLVH    198

BSNT_01139___    201 ADLHHGNFNWDHGKITAFDFDDIGYNWFVNDISILLYNVLWYPVVPYDDK    250
                     |||||||||||:||||||||||||||||||||||||||:|||||:||:||
RBAM_007040__    199 ADLHHGNFNWDNGKITAFDFDDIGYNWFVNDISILLYNMLWYPVIPYEDK    248

BSNT_01139___    251 AAFTEEFMTHFMKGYWEENELDPAWLMIIPDFLRLRHMLIYGLLHQMFDL    300
                     ||||.||||||||||.|||:||||||..||||||||||||||||||.|||
RBAM_007040__    249 AAFTGEFMTHFMKGYREENDLDPAWLEHIPDFLRLRHMLIYGLLHQAFDL    298

BSNT_01139___    301 NTIGEEEKEMLAGFRRDIENGTPITAFDFSALV    333
                     |::|:||:|||..|||||||.||||.::|||.|
RBAM_007040__    299 NSLGDEEREMLKAFRRDIENETPITEYNFSAFV    331


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