Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01131 and RBAM_007000

See DNA alignment / Visit BSNT_01131 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:49
# Commandline: needle
#    -asequence pep-align/BSNT_01131___pcrB.1.9828.seq
#    -bsequence pep-align/RBAM_007000___pcrB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01131___pcrB-RBAM_007000___pcrB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01131___pcrB-RBAM_007000___pcrB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01131___pcrB
# 2: RBAM_007000___pcrB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 229
# Identity:     190/229 (83.0%)
# Similarity:   208/229 (90.8%)
# Gaps:           1/229 ( 0.4%)
# Score: 995.0
# 
#
#=======================================

BSNT_01131___      1 MYDVTEWKHVFKLDPNKDLPDEQLEILCESGTDAVIIGGSDGVTEDNVLR     50
                     ||||.||||||||||||||||||||.||||||||::|||||.:|||||||
RBAM_007000__      1 MYDVNEWKHVFKLDPNKDLPDEQLERLCESGTDAIVIGGSDNITEDNVLR     50

BSNT_01131___     51 MMSKVRRFLVPCVLEVSAIEAIVPGFDLYFIPSVLNSKNADWIVGMHQKA    100
                     :||||||||||||||||.|::|||||||||||||||||.||||||||.:|
RBAM_007000__     51 LMSKVRRFLVPCVLEVSTIDSIVPGFDLYFIPSVLNSKKADWIVGMHHQA    100

BSNT_01131___    101 MKEYGELMSMEEIVAEGYCIANPDCKAAALTEADADLNMDDIVAYARVSE    150
                     ||||||||||||||.|||||.|||||||||||||..:..:||:|||||:|
RBAM_007000__    101 MKEYGELMSMEEIVTEGYCIVNPDCKAAALTEADTHIETEDILAYARVAE    150

BSNT_01131___    151 -LLQLPIFYLEYSGMLGDIEAVKKTKAVLETSTLFYGGGIKDAETAKQYA    199
                      ||.||||||||||||.|||.|:||||||:.|.|||||||||||||:::.
RBAM_007000__    151 HLLHLPIFYLEYSGMLADIEMVEKTKAVLDKSVLFYGGGIKDAETAERFG    200

BSNT_01131___    200 EHADVIVVGNAVYEDFDRALKTVAAVKGE    228
                     .||||||||||||||||:|||||||||.:
RBAM_007000__    201 RHADVIVVGNAVYEDFDQALKTVAAVKTK    229


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