Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01129 and RBAM_006990

See DNA alignment / Visit BSNT_01129 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:49
# Commandline: needle
#    -asequence pep-align/BSNT_01129___yerD.1.9828.seq
#    -bsequence pep-align/RBAM_006990___yerD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01129___yerD-RBAM_006990___yerD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01129___yerD-RBAM_006990___yerD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01129___yerD
# 2: RBAM_006990___yerD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 525
# Identity:     411/525 (78.3%)
# Similarity:   467/525 (89.0%)
# Gaps:           1/525 ( 0.2%)
# Score: 2219.0
# 
#
#=======================================

BSNT_01129___      1 METIIIALIAFITGIIAIPIVLFAWIYIKDEKQQEHSILRNYPVIGRFRY     50
                     ||..||.||..:..||.:|..||.||||:||||:|||:||||||.|:.||
RBAM_006990__      1 MEQAIIVLICILIFIILVPAALFLWIYIRDEKQEEHSVLRNYPVAGKLRY     50

BSNT_01129___     51 ILEKIGPELRQYLYSNDNEEQPFSRKEYEQTVISGKYKSRMMGFGSVRDF    100
                     |.|||||||||||:|||||||||||:||||||:|||||||||||||.|||
RBAM_006990__     51 IFEKIGPELRQYLFSNDNEEQPFSRREYEQTVMSGKYKSRMMGFGSERDF    100

BSNT_01129___    101 DKPGYYIRNAMFPKQREEMHVNQTPKIETQIYKMDADNLFKRKEHAEHIK    150
                     ::||||||||:|||||||:..:|||||:|.:||:|.|||.||.||.|..|
RBAM_006990__    101 NQPGYYIRNALFPKQREELRADQTPKIDTMVYKIDKDNLLKRSEHREKAK    150

BSNT_01129___    151 ADPYFLHPDDVQVIGEHTCEKPFYVKGLVGQSAMSYGSLGERAVTALSKG    200
                     ||||:||||||||||..||:||||||||:|||||||||||:||:||||||
RBAM_006990__    151 ADPYYLHPDDVQVIGRDTCKKPFYVKGLIGQSAMSYGSLGDRAITALSKG    200

BSNT_01129___    201 LHQAGGTWMNTGEGGLSEYHLKGGADIICQIGPGLFGVRKRNGEFSWEEF    250
                     |||||||||||||||||||||||||||||||||||||||..:||||||||
RBAM_006990__    201 LHQAGGTWMNTGEGGLSEYHLKGGADIICQIGPGLFGVRTEDGEFSWEEF    250

BSNT_01129___    251 KRKSRIDQIKAFELKLAQGAKTRGGHVDGAKVSEEVADIRNVEPGKSIDS    300
                     |:|||::||||||||||||||.||||:||:||:||:|.||||:||:||||
RBAM_006990__    251 KKKSRLEQIKAFELKLAQGAKARGGHIDGSKVTEEIAAIRNVQPGQSIDS    300

BSNT_01129___    301 PNRFYEFSKPPEMLDFIEKLRDVGQKPVGIKLVAGHPEELHELFSHMQKS    350
                     ||||.|||..|:|||||||||.||:||||||:|.|..::|.:|.|.|..|
RBAM_006990__    301 PNRFNEFSNVPDMLDFIEKLRTVGEKPVGIKIVPGSRKDLEDLISCMSSS    350

BSNT_01129___    351 GKHPDFITIDGSEGGTGASFYELADTVGLPIMTALPIVDTLLKQYGFRSQ    400
                     ||.|||||||||||||||||:||||:|||||:|.||:||.|||.||.|.:
RBAM_006990__    351 GKLPDFITIDGSEGGTGASFHELADSVGLPILTGLPLVDGLLKTYGIRDK    400

BSNT_01129___    401 LKIFASGKLLTPDKIAVALALGADFVNIARGMMFSVGCIRALVCHTNTCP    450
                     |||||||||||||||||||||||||||||||||||||||||.|||||.||
RBAM_006990__    401 LKIFASGKLLTPDKIAVALALGADFVNIARGMMFSVGCIRAQVCHTNHCP    450

BSNT_01129___    451 AGVATTDPKLQKALSVEEKQHRVCNYVISLREGLFNLAAAAGINSPIHFS    500
                     .||||||||||:|||:|:|||||||||:|||||||:|||||||:||||||
RBAM_006990__    451 VGVATTDPKLQRALSIEDKQHRVCNYVLSLREGLFHLAAAAGISSPIHFS    500

BSNT_01129___    501 KEHVVYRKEDGSIIDIDNLIHQFVS    525
                     .||:|||:||||:.::..|::|.. 
RBAM_006990__    501 AEHIVYREEDGSLRELPGLLNQHA-    524


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