Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01127 and RBAM_006980

See DNA alignment / Visit BSNT_01127 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:49
# Commandline: needle
#    -asequence pep-align/BSNT_01127___yerC.1.9828.seq
#    -bsequence pep-align/RBAM_006980___yerC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01127___yerC-RBAM_006980___yerC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01127___yerC-RBAM_006980___yerC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01127___yerC
# 2: RBAM_006980___yerC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 104
# Identity:      94/104 (90.4%)
# Similarity:    99/104 (95.2%)
# Gaps:           1/104 ( 1.0%)
# Score: 480.0
# 
#
#=======================================

BSNT_01127___      1 MQIDKLRGKELDQLFNSILSLKDLEECYRFFDDLCTINEIQSLAQRLEVA     50
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
RBAM_006980__      1 MQIDKLRGKELDQLFLSILSLKDLEECYRFFDDLCTINEIQSLAQRLEVA     50

BSNT_01127___     51 RMLREGNTYHKIETETGASTATISRVKRCLNYGNDAYEMALDRVKENETE    100
                     |||||||||||||:||||||||||||||||||||||||||||||.:.|:.
RBAM_006980__     51 RMLREGNTYHKIESETGASTATISRVKRCLNYGNDAYEMALDRVNKGESS    100

BSNT_01127___    101 SSSK    104
                     |:: 
RBAM_006980__    101 SAT-    103


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