Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01124 and RBAM_006960
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:48
# Commandline: needle
# -asequence pep-align/BSNT_01124___yerA.1.9828.seq
# -bsequence pep-align/RBAM_006960___yerA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01124___yerA-RBAM_006960___yerA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01124___yerA-RBAM_006960___yerA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01124___yerA
# 2: RBAM_006960___yerA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 580
# Identity: 504/580 (86.9%)
# Similarity: 543/580 (93.6%)
# Gaps: 0/580 ( 0.0%)
# Score: 2702.0
#
#
#=======================================
BSNT_01124___ 1 MSERTFNWKNKDIRAQVDVVDSKLLPTLLLRNALVLNPYVKQWLKKNIWI 50
||||||||||||||:|.||||||||||||||:||||||::|||||||:||
RBAM_006960__ 1 MSERTFNWKNKDIRSQADVVDSKLLPTLLLRDALVLNPFLKQWLKKNVWI 50
BSNT_01124___ 51 YQDRIVYVGHELPNRAEEIHTIDCEGKYIVPGYIEPHAHPFQIYNPQTLA 100
|.|||||||.|||:.||.||||:||||||||||||||.||||||||||||
RBAM_006960__ 51 YGDRIVYVGDELPDAAEHIHTINCEGKYIVPGYIEPHTHPFQIYNPQTLA 100
BSNT_01124___ 101 EYVSQYGTTTFVNDNLFLLLQSGKKKALTILNELKKQPVQYFWWSRYDLQ 150
|||||:|||||||||||.||.||||||||||.||||||||||||||||||
RBAM_006960__ 101 EYVSQFGTTTFVNDNLFFLLHSGKKKALTILEELKKQPVQYFWWSRYDLQ 150
BSNT_01124___ 151 TEVLNEDHVLPFDVRKQWIEHPDVIQGGEMTGWPRLVDGDDLMLHCMQAT 200
|||||||.:|.||||||||||||||||||:||||||:|||||||||||||
RBAM_006960__ 151 TEVLNEDQLLSFDVRKQWIEHPDVIQGGELTGWPRLMDGDDLMLHCMQAT 200
BSNT_01124___ 201 KKQRKRIEGHFPGASDKTLTKMKLFGADCDHEAMTGDEVMRRLELGYYVS 250
||.||||||||||||:||||||||||||.|||||.|.|||||||||||||
RBAM_006960__ 201 KKLRKRIEGHFPGASEKTLTKMKLFGADSDHEAMNGGEVMRRLELGYYVS 250
BSNT_01124___ 251 LRNSSIRPDVRKILQELHEKGFRYYDHFFYTTDGATPNFYKGGMTNELIR 300
||:||||||:|.|||:||:||||:|||||||||||||:|||||||||||:
RBAM_006960__ 251 LRHSSIRPDLRTILQDLHQKGFRHYDHFFYTTDGATPHFYKGGMTNELIK 300
BSNT_01124___ 301 IALEEGVPAIDAYNMASFNIAKYYQMDDYLGVVGPGRLASLNILEAPLNP 350
||||||||||||||||||||||||||||:|||||||||||||||:.|:||
RBAM_006960__ 301 IALEEGVPAIDAYNMASFNIAKYYQMDDFLGVVGPGRLASLNILDDPMNP 350
BSNT_01124___ 351 NPVTVLSKGTILREDGCDLKAFTKTDWHKGGLVSLELSYDMTMDDLQFSM 400
:||||:|||.:|||||.::.|||:|||.|||||.||||||||||||||||
RBAM_006960__ 351 DPVTVISKGILLREDGRNMNAFTETDWKKGGLVPLELSYDMTMDDLQFSM 400
BSNT_01124___ 401 PMGVKMRNAVIMEPYMIEIDNSMEQLSFDHDESYLTMLDRHGKWRVNTMI 450
||||.||||||||||||.||||::||||||||.|||:||:|||||||||:
RBAM_006960__ 401 PMGVTMRNAVIMEPYMIAIDNSVDQLSFDHDECYLTLLDKHGKWRVNTML 450
BSNT_01124___ 451 KGFASSVQGFVSSFTTTGDIVAIGKNKADMLLAFARMKEIGGGIVLAENR 500
||||..|||||||:||||||:|.||||.|:||||:||||||||||||||.
RBAM_006960__ 451 KGFADRVQGFVSSYTTTGDIIAAGKNKEDILLAFSRMKEIGGGIVLAENG 500
BSNT_01124___ 501 NILHEIPLALCGCASSEAYEDVLEKEQKLRDLLTERGYEFCDPIYTLLFL 550
.|||||||||.|.||:|.||:|||||||||.||.||||.|||||||||||
RBAM_006960__ 501 KILHEIPLALNGSASAEKYEEVLEKEQKLRMLLEERGYRFCDPIYTLLFL 550
BSNT_01124___ 551 QSTHLPYIRITPRGIFDVMKKTVLFPSIMR 580
||||||||||||||||||||||||||||||
RBAM_006960__ 551 QSTHLPYIRITPRGIFDVMKKTVLFPSIMR 580
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