Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01116 and RBAM_006950

See DNA alignment / Visit BSNT_01116 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:48
# Commandline: needle
#    -asequence pep-align/BSNT_01116___purD.1.9828.seq
#    -bsequence pep-align/RBAM_006950___purD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01116___purD-RBAM_006950___purD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01116___purD-RBAM_006950___purD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01116___purD
# 2: RBAM_006950___purD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 422
# Identity:     355/422 (84.1%)
# Similarity:   388/422 (91.9%)
# Gaps:           0/422 ( 0.0%)
# Score: 1832.0
# 
#
#=======================================

BSNT_01116___      1 MNVLIIGKGGREHTLAWKAAQSSLVENVFAAPGNDGMEASAQLVNIEESD     50
                     ||||||||||||||||||||||.||:.|:.|||||||...|.||||||||
RBAM_006950__      1 MNVLIIGKGGREHTLAWKAAQSPLVDTVYTAPGNDGMADCATLVNIEESD     50

BSNT_01116___     51 HAGLVSFAKENQVGLTIVGPEVPLIEGLVDEFEKAGLRVFGPSKAAAIIE    100
                     ||.|::||||::|||||:|||||||||:.||||||||.|||||:.|||||
RBAM_006950__     51 HAALIAFAKEHRVGLTIIGPEVPLIEGIADEFEKAGLLVFGPSEKAAIIE    100

BSNT_01116___    101 GSKQFAKDLMKKYDIPTAEYDTFTSFDEAKAYVLEKGAPIVIKADGLAAG    150
                     |||||||||||||.||||||:|||||:||||||.:|||||||||||||||
RBAM_006950__    101 GSKQFAKDLMKKYGIPTAEYETFTSFEEAKAYVQQKGAPIVIKADGLAAG    150

BSNT_01116___    151 KGVTVAMTEEEAIACLHDFLEDEKFGDASASVVIEEYLSGEEFSLMAFVK    200
                     |||||||||||||.||||||||||||:|||||||||:|:|||||||||||
RBAM_006950__    151 KGVTVAMTEEEAIECLHDFLEDEKFGEASASVVIEEFLAGEEFSLMAFVK    200

BSNT_01116___    201 GEKVYPMVIAQDHKRAFDGDKGPNTGGMGAYSPVPQISDETVRHAVETIV    250
                     ||.|||||||||||||||||.||||||||||||||.|||:.||.||||||
RBAM_006950__    201 GETVYPMVIAQDHKRAFDGDNGPNTGGMGAYSPVPHISDDIVRSAVETIV    250

BSNT_01116___    251 KPAAKAMVQEGRSFTGVLYAGLMLTENGSKVIEFNARFGDPETQVVLPRM    300
                     ||||||||:|||||||||||||:|||||||||||||||||||||||:|||
RBAM_006950__    251 KPAAKAMVKEGRSFTGVLYAGLILTENGSKVIEFNARFGDPETQVVVPRM    300

BSNT_01116___    301 ESDLVQVLLDLLDDKEVDLRWKDTAAVSVVLASEGYPESYAKGTPIGSLA    350
                     ||||:|||.|||.:|:||||||||||||||||||||||.||||||||||.
RBAM_006950__    301 ESDLIQVLFDLLHEKDVDLRWKDTAAVSVVLASEGYPEGYAKGTPIGSLT    350

BSNT_01116___    351 AETEQVVVFHAGTKAEGGEFVTNGGRVANVTAFDESFEAARDRVYKAVDE    400
                     :..:.:.|||||||.:||:||||||||||||||.|:||||||:||.||..
RBAM_006950__    351 SAEDGIAVFHAGTKKDGGQFVTNGGRVANVTAFAETFEAARDKVYSAVSG    400

BSNT_01116___    401 IFKPGLFFRKDIGARALKAAQK    422
                     :.|||||:|.|||||||||:|:
RBAM_006950__    401 LTKPGLFYRSDIGARALKASQR    422


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