Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01105 and RBAM_006870

See DNA alignment / Visit BSNT_01105 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:47
# Commandline: needle
#    -asequence pep-align/BSNT_01105___purC.1.9828.seq
#    -bsequence pep-align/RBAM_006870___purC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01105___purC-RBAM_006870___purC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01105___purC-RBAM_006870___purC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01105___purC
# 2: RBAM_006870___purC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 241
# Identity:     210/241 (87.1%)
# Similarity:   226/241 (93.8%)
# Gaps:           2/241 ( 0.8%)
# Score: 1097.0
# 
#
#=======================================

BSNT_01105___      1 MNIVKNELLYEGKAKKIYKTDDENTLYVVYKDSATAFNGEKKAEISGKGR     50
                     ||||.|.||||||||:||:|:||..|.|||||||||||||||||||||||
RBAM_006870__      1 MNIVNNNLLYEGKAKRIYQTEDEQILRVVYKDSATAFNGEKKAEISGKGR     50

BSNT_01105___     51 LNNEISSLIFKHLHGKGINNHFIERISETEQLIKKVTIVPLEVVVRNVVA    100
                     ||||||||||||||.|||:|||:||:||:|||||||:|:||||||||:.|
RBAM_006870__     51 LNNEISSLIFKHLHAKGIDNHFVERVSESEQLIKKVSIIPLEVVVRNIAA    100

BSNT_01105___    101 GSMSKRLGIPEGTELEQPIIEFYYKDDALGDPLITEDHIWLLKAATPEQV    150
                     |||||||||||||:|.|||||||||||||||||||||||||||||.||||
RBAM_006870__    101 GSMSKRLGIPEGTKLPQPIIEFYYKDDALGDPLITEDHIWLLKAAAPEQV    150

BSNT_01105___    151 ETIKSITKTVNEELQSIFDDCHVRLIDFKLEFGLDADGQVLLADEISPDT    200
                     ||||||||.||:|||.||:||.||||||||||||||:|:|||||||||||
RBAM_006870__    151 ETIKSITKQVNQELQHIFEDCGVRLIDFKLEFGLDAEGRVLLADEISPDT    200

BSNT_01105___    201 CRLWDKETNEKLDKDLFRRNLGSLTDAYEEIFKRLGGIHHV    241
                     ||||||:|||||||||||||||||||||||||||||||.  
RBAM_006870__    201 CRLWDKDTNEKLDKDLFRRNLGSLTDAYEEIFKRLGGIS--    239


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