Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01105 and RBAM_006870
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:47
# Commandline: needle
# -asequence dna-align/BSNT_01105___purC.1.9828.seq
# -bsequence dna-align/RBAM_006870___purC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01105___purC-RBAM_006870___purC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01105___purC-RBAM_006870___purC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01105___purC
# 2: RBAM_006870___purC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 735
# Identity: 586/735 (79.7%)
# Similarity: 586/735 (79.7%)
# Gaps: 24/735 ( 3.3%)
# Score: 2323.0
#
#
#=======================================
BSNT_01105___ 1 GTGAATATTGTGAAGAATGAACTTTTATACGAAGGAAAAGCAAAAAAGAT 50
||||||||||||||.|||.|.|||.|.||.|||||||||||.|||...||
RBAM_006870__ 1 GTGAATATTGTGAACAATAATCTTCTTTATGAAGGAAAAGCGAAACGAAT 50
BSNT_01105___ 51 CTACAAAACCGATGACGAAAACA-----CGCTGTATGTCGTGTATAAAGA 95
.||..||||.||.||||||.|.| ||| ||.||.||.||.||
RBAM_006870__ 51 TTATCAAACTGAAGACGAACAGATTCTCCGC-----GTGGTCTACAAGGA 95
BSNT_01105___ 96 CTCCGCCACTGCCTTTAACGGCGAGAAAAAAGCAGAAATCAGCGGGAAAG 145
.|||||.||.|||||||||||.|||||||||||.||.|||||| ||||||
RBAM_006870__ 96 TTCCGCAACAGCCTTTAACGGTGAGAAAAAAGCGGAGATCAGC-GGAAAG 144
BSNT_01105___ 146 GG-CGCTTAAATAACGAGATTTCAAGCTTAATTTTCAAACACCTTCATGG 194
|| ||..|.||.||.||.|||||||||.|.|||||||||||.||.||.|.
RBAM_006870__ 145 GGCCGTCTGAACAATGAAATTTCAAGCCTGATTTTCAAACATCTGCACGC 194
BSNT_01105___ 195 AAAGGGCATTAACAATCATTTTATCGAGCGCATTTCGGAAACGGAACAGC 244
.||.||.|||.||||.||.|||.|.|||||..||||.|||.|.||.||||
RBAM_006870__ 195 CAAAGGAATTGACAACCACTTTGTGGAGCGTGTTTCAGAATCAGAGCAGC 244
BSNT_01105___ 245 TCATTAAAAAGGTAACGATTGTGCCGCTTGAAGTCGTGGTCAGAAATGTT 294
|.||.|||||.||.|..||..|.|||||||||||||||||||||||..||
RBAM_006870__ 245 TTATCAAAAAAGTGAGCATCATTCCGCTTGAAGTCGTGGTCAGAAACATT 294
BSNT_01105___ 295 GTGGCAGGAAGCATGTCCAAACGTCTCGGCATTCCAGAAGGCACGGAGCT 344
|..||.|||||||||||.||||||||||||||.||.|||||.||..||||
RBAM_006870__ 295 GCCGCCGGAAGCATGTCGAAACGTCTCGGCATCCCGGAAGGAACTAAGCT 344
BSNT_01105___ 345 TGAGCAGCCGATTATCGAGTTTTACTACAAGGATGACGCGCTGGGTGATC 394
|...||||||||||||||.||||||||.||.||||||||.||.||.||||
RBAM_006870__ 345 TCCACAGCCGATTATCGAATTTTACTATAAAGATGACGCACTCGGCGATC 394
BSNT_01105___ 395 CGCTCATCACAGAAGATCATATTTGGCTTTTGAAAGCAGCGACTCCTGAG 444
||||||||||||||||||||||.||||||||.|||||.|||.||||||||
RBAM_006870__ 395 CGCTCATCACAGAAGATCATATCTGGCTTTTAAAAGCGGCGGCTCCTGAG 444
BSNT_01105___ 445 CAGGTAGAAACCATTAAGTCCATTACAAAAACA-GTAAACGAAGAGCTTC 493
|||||.|||||.||.||.||.||||| |||||| ||.||..|||||||.|
RBAM_006870__ 445 CAGGTGGAAACGATCAAATCGATTAC-AAAACAGGTGAATCAAGAGCTGC 493
BSNT_01105___ 494 AAAGC--ATTTTCGACGATTGTCATGTCAGATTAATAGATTTCAAGCTTG 541
||| |||||.||.||.||....|||||||||||||||||.|||||.|
RBAM_006870__ 494 --AGCATATTTTTGAAGACTGCGGCGTCAGATTAATAGATTTTAAGCTGG 541
BSNT_01105___ 542 AATTCGGTCTAGATGCAGACGGGCAAGTGCTTTTGGCGGATGAAATTTCA 591
|||||||..||||.|||||.||.|..||||||||.||||||||||||||.
RBAM_006870__ 542 AATTCGGCTTAGACGCAGAGGGACGGGTGCTTTTAGCGGATGAAATTTCT 591
BSNT_01105___ 592 CCTGACACATGCCGCTTGTGGGATAAAGAAACGAACGAAAAGCTGGACAA 641
||||||||.|||||..|||||||.|||||.||.|||||||||||.||.||
RBAM_006870__ 592 CCTGACACGTGCCGTCTGTGGGACAAAGACACAAACGAAAAGCTCGATAA 641
BSNT_01105___ 642 AGATTTATTCAGACGCAATCTGGGAAGCTTAACCGACGCATACGAAGAGA 691
||||||.||||||||.||.|||||||||||||||||||||||.|||||||
RBAM_006870__ 642 AGATTTGTTCAGACGGAACCTGGGAAGCTTAACCGACGCATATGAAGAGA 691
BSNT_01105___ 692 TTTTCAAAAGACTGGGAGGCATTCATCATGTATAA 726
||||||||||||||||||||||| || ||||
RBAM_006870__ 692 TTTTCAAAAGACTGGGAGGCATT--TC----ATAA 720
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