Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01095 and RBAM_006800

See DNA alignment / Visit BSNT_01095 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:47
# Commandline: needle
#    -asequence pep-align/BSNT_01095___yebC.1.9828.seq
#    -bsequence pep-align/RBAM_006800___yebC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01095___yebC-RBAM_006800___yebC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01095___yebC-RBAM_006800___yebC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01095___yebC
# 2: RBAM_006800___yebC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 267
# Identity:     163/267 (61.0%)
# Similarity:   196/267 (73.4%)
# Gaps:           7/267 ( 2.6%)
# Score: 834.5
# 
#
#=======================================

BSNT_01095___      1 MTEERKETFEEEINQSERIDADEEPLSRMSRKASRQSKQKQKQKQKPRQE     50
                     ||||||||.|||   .:....||||||||||.|.|..|||:|.|::    
RBAM_006800__      1 MTEERKETLEEE---KQHQGTDEEPLSRMSRNAGRYQKQKKKDKER----     43

BSNT_01095___     51 RGESTVKDKLASVWAAINRYCGFAFSILKSPAKTVVTDGFSHYKYGLISM    100
                     |......:||||.|||:.|||.||..||.||.|.|..||||.:||.||||
RBAM_006800__     44 RPAPAFTEKLASAWAAVKRYCRFALRILTSPVKVVGEDGFSRFKYALISM     93

BSNT_01095___    101 LIFSIIFSIGNWFQLKASWNRPLGFGERHHAFYDGFLVVLVYLLIFFAVM    150
                     |:|||.|||||||||:||..||||:|||||.|:|||.|||||.|:|||..
RBAM_006800__     94 LVFSIFFSIGNWFQLRASQQRPLGYGERHHTFFDGFTVVLVYTLVFFAAA    143

BSNT_01095___    151 VFAIWAVSRYMMKQKVTFREAAAVLGSLLVPVIAVSILWLIFAIVNIPML    200
                     ..|:|.|||||||||:|.|:|||.:||||||.:|.||:|:||||:|:|::
RBAM_006800__    144 AGAVWLVSRYMMKQKITMRDAAAGVGSLLVPAVACSIVWMIFAILNLPVI    193

BSNT_01095___    201 TVLFTVLILFSIFFIIALYVQRVYQAAQDAPIDYIYCVFAVVAIALLFTA    250
                     ||:||.|.||.....:..:||.:|::|:....|.:||:.|.|.|.|:|||
RBAM_006800__    194 TVVFTALTLFLAASAMVQFVQILYKSAEKPAADVMYCISAAVIIMLIFTA    243

BSNT_01095___    251 VTWPFISEYFTASLIPL    267
                     ||||.||||||||||||
RBAM_006800__    244 VTWPLISEYFTASLIPL    260


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