Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01088 and RBAM_006740
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:46
# Commandline: needle
# -asequence pep-align/BSNT_01088.1.9828.seq
# -bsequence pep-align/RBAM_006740___yeaD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01088-RBAM_006740___yeaD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01088-RBAM_006740___yeaD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01088
# 2: RBAM_006740___yeaD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 399
# Identity: 219/399 (54.9%)
# Similarity: 289/399 (72.4%)
# Gaps: 6/399 ( 1.5%)
# Score: 1133.5
#
#
#=======================================
BSNT_01088 1 MNKKWQWLVYGWKLIILTLLTAAVFSYAMFQGGFVSWFLFYTFLPFVLYA 50
|.||..||:|||||::|.:||||||||||||||||||||||.||||.:||
RBAM_006740__ 1 MRKKMHWLLYGWKLLMLAVLTAAVFSYAMFQGGFVSWFLFYAFLPFTVYA 50
BSNT_01088 51 GLLALYPLRSFQASRQMDKTQLHAGDRLGVTVTLRRKLPFPLMYMVIEDC 100
||:|:||||:||.:|.:...||.:||||.||:.|.|:|||||.||||||.
RBAM_006740__ 51 GLVAVYPLRAFQVARDVSSAQLTSGDRLSVTIRLTRRLPFPLTYMVIEDV 100
BSNT_01088 101 LPEGIESLNRDGAAAKRLVFPWFKRSMTMSYELARVPRGEHHFHSVRVRT 150
:||.: .:..:||:||||||:|.:|:.|||.:|||||||.|::||||
RBAM_006740__ 101 MPETL----GERRSAKQLVFPWFQRKLTLQYELPQVPRGEHHLHTIRVRT 146
BSNT_01088 151 GDVLGLIEKTTFFELDDTLFVYPFYQRFSYQVNERHQEDGVSGSSPIHQH 200
||||||::||..|.:.||:.|:|.|....|:......|:|.:..:|...|
RBAM_006740__ 147 GDVLGLLDKTASFSVTDTVLVFPAYGSVHYKPQAASGEEGTAAGAPFQVH 196
BSNT_01088 201 HSSVAASVRNYQPGDRFAALDWKTSARRSQLMTKEFEPSRSKNLFLLMDR 250
.|::|||||||||||||:||||||||||::||||||:|.:|.|:.||:|.
RBAM_006740__ 197 RSAMAASVRNYQPGDRFSALDWKTSARRNELMTKEFDPLQSVNMILLLDC 246
BSNT_01088 251 FSSDAFEEVVSVTASILYSVLKNGAGAGLASIGKEKNIFPIQEGDQHFKH 300
..|.:||..||.:||:||:.|..|:.||..|:|.::.:||::|||:||:.
RBAM_006740__ 247 RPSPSFEAAVSASASLLYTALVKGSPAGFISLGSDRTVFPVREGDRHFRK 296
BSNT_01088 301 MLRHLAIA-HCDAADPISRYAREELGKPSVRQADQVVVTGQLTEDMLHLA 349
|||:||.| ..:.||...|..: ||..|.||:|...||||.||||:|..|
RBAM_006740__ 297 MLRYLASASESEEADAGGRLGK-ELADPRVRKASIAVVTGSLTEDLLKQA 345
BSNT_01088 350 EIGGGRVTVILAKEKDAELSQAENAMIERMMKRQIRVRVMRGGRVSRVV 398
|.|...:||.||||.:|.||:.|..:.....::.|:|:::|..|||.||
RBAM_006740__ 346 EPGRADMTVFLAKETNAALSEKERKLALIFAQKNIKVQMIRDKRVSHVV 394
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