Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01087 and RBAM_006730
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:46
# Commandline: needle
# -asequence pep-align/BSNT_01087___yeaC.1.9828.seq
# -bsequence pep-align/RBAM_006730___yeaC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01087___yeaC-RBAM_006730___yeaC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01087___yeaC-RBAM_006730___yeaC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01087___yeaC
# 2: RBAM_006730___yeaC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 320
# Identity: 259/320 (80.9%)
# Similarity: 286/320 (89.4%)
# Gaps: 0/320 ( 0.0%)
# Score: 1333.0
#
#
#=======================================
BSNT_01087___ 1 MAYQEDLHPLLGKAVEHINRVMVGKRDIAILSLAALLAKGHVLLEDVPGV 50
|||:|:|||||.||||||..:::||||||||||||:||||||||||||||
RBAM_006730__ 1 MAYKEELHPLLEKAVEHIENIIIGKRDIAILSLAAILAKGHVLLEDVPGV 50
BSNT_01087___ 51 GKTMMVRALAKSIGADFKRIQFTPDLLPSDVTGVSIYNAKTMEFEYRPGP 100
|||||||||||.||||||||||||||||||||||||||.|||||||||||
RBAM_006730__ 51 GKTMMVRALAKLIGADFKRIQFTPDLLPSDVTGVSIYNTKTMEFEYRPGP 100
BSNT_01087___ 101 IMGNIVLADEINRTSPKTQSALLEAMEEGSVTVDGHTMQLAAPFFVMATQ 150
||||||||||||||||||||:||||||||:||:||.||:||.||||||||
RBAM_006730__ 101 IMGNIVLADEINRTSPKTQSSLLEAMEEGNVTIDGKTMRLAEPFFVMATQ 150
BSNT_01087___ 151 NPVEYEGTYPLPEAQLDRFLFKLRMGYPSFNEELDVLSLQEKSHPIETLE 200
||||||||||||||||||||||||||||:..|||.||||||..:|:||:|
RBAM_006730__ 151 NPVEYEGTYPLPEAQLDRFLFKLRMGYPTAEEELQVLSLQEGRNPLETIE 200
BSNT_01087___ 201 PVIAKEDFIFLQREVQNVRADDSIKEYIVEIVQKTRQHPSVQLGVSPRGS 250
|||:||.||.||::::.||.||.||.|||.|.|.||:||||.||||||||
RBAM_006730__ 201 PVISKEQFISLQQKLEQVRVDDGIKAYIVGITQHTRRHPSVHLGVSPRGS 250
BSNT_01087___ 251 IALMKAAQAYALLHHRDYVIPDDIQYLAPFTLPHRMMLHPEAKFEGIQAE 300
|:||||||||||||.||||||||:|||||:||||||:|..||||..:..|
RBAM_006730__ 251 ISLMKAAQAYALLHDRDYVIPDDVQYLAPYTLPHRMILTAEAKFNDVTPE 300
BSNT_01087___ 301 AIVREIMSAVKVPVQRSSVR 320
||:.:||...||||||.|||
RBAM_006730__ 301 AIIEDIMQTEKVPVQRMSVR 320
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