Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01087 and RBAM_006730

See Amino acid alignment / Visit BSNT_01087 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:46
# Commandline: needle
#    -asequence dna-align/BSNT_01087___yeaC.1.9828.seq
#    -bsequence dna-align/RBAM_006730___yeaC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01087___yeaC-RBAM_006730___yeaC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01087___yeaC-RBAM_006730___yeaC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01087___yeaC
# 2: RBAM_006730___yeaC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 973
# Identity:     724/973 (74.4%)
# Similarity:   724/973 (74.4%)
# Gaps:          20/973 ( 2.1%)
# Score: 2599.0
# 
#
#=======================================

BSNT_01087___      1 ATGGCATATCAAGAAGACCTGCATCCTTTGCTGGGGAAAGCAGTTGAACA     50
                     |||||.|||.|||||||.||||||||..||||||.||||||.|||||.||
RBAM_006730__      1 ATGGCTTATAAAGAAGAGCTGCATCCGCTGCTGGAGAAAGCCGTTGAGCA     50

BSNT_01087___     51 TATT-AATAGAGTAATGGTTGGAAAACGAGACATCGCCATACTCAGCTTA     99
                     |||| ||.|.| |.||..|.||||||||.||.||||||||||||||..|.
RBAM_006730__     51 TATTGAAAACA-TCATCATAGGAAAACGGGATATCGCCATACTCAGTCTG     99

BSNT_01087___    100 GCAGCCCTTCTTGCCAAAGGGCATGTACTGCTTGAGGATGTACCCGGAGT    149
                     ||.|||.||||.||.|||||||||||.|||||.||.||.||.||.|||||
RBAM_006730__    100 GCCGCCATTCTCGCGAAAGGGCATGTGCTGCTGGAAGACGTGCCGGGAGT    149

BSNT_01087___    150 CGGAAAAACGATGATGGTCCGCGCGCTGGCAAAGTCAATCGGCGCTGATT    199
                     ||||||||||||||||||||||||..||||.|||...|||||.|||||.|
RBAM_006730__    150 CGGAAAAACGATGATGGTCCGCGCTTTGGCCAAGCTGATCGGAGCTGACT    199

BSNT_01087___    200 TCAAAAGAATCCAATTCACTCCTGATTTGCTGCCATCTGATGTAACAGGG    249
                     |.||.||.||.||.|||||.||.|||.|.|||||.||.|||||.||.||.
RBAM_006730__    200 TTAAGAGGATTCAGTTCACGCCGGATCTTCTGCCGTCAGATGTGACGGGA    249

BSNT_01087___    250 GTATCTATCTATAATGCGAAAACGATGGAATTTGAATATCGTCCCGGCCC    299
                     ||.|||||.||||||.||||||||||||||||||||||.||.||.||.||
RBAM_006730__    250 GTCTCTATTTATAATACGAAAACGATGGAATTTGAATACCGCCCGGGACC    299

BSNT_01087___    300 AATTATGGGAAATATCGTGCTGGCCGATGAAATCAACCGTACCTCTCCGA    349
                     .||.|||||.||||||||||||||.||||||||.|||.|.||||||||||
RBAM_006730__    300 GATCATGGGGAATATCGTGCTGGCTGATGAAATTAACAGAACCTCTCCGA    349

BSNT_01087___    350 AGACACAGTCGGCTTTGCTCGAAGCGATGGAAG-AGGGAAGCGTCACGGT    398
                     |.||.|||||..|..||||.||.||.|||||.| |||||| .||||||.|
RBAM_006730__    350 AAACGCAGTCTTCCCTGCTTGAGGCAATGGAGGAAGGGAA-TGTCACGAT    398

BSNT_01087___    399 AGATGGCCATACGATGCAGCTTGCCGCTCCTTTTTTTGTGATGGCAACGC    448
                     .||.||..|.||.||||.|||.||.|..||.|||||.||.|||||.||.|
RBAM_006730__    399 TGACGGAAAGACAATGCGGCTGGCTGAGCCGTTTTTCGTCATGGCCACAC    448

BSNT_01087___    449 AAAACCCGGTCGAATATGAAGGGACCTATCCTTTGCCGGAAGCTCAGCTT    498
                     ||||||||||.|||||||||||.||.|||||..|.||.|||||.||||||
RBAM_006730__    449 AAAACCCGGTTGAATATGAAGGAACGTATCCGCTTCCCGAAGCCCAGCTT    498

BSNT_01087___    499 GACCGTTTTTTATTCAAACTTCGGATGGGTTATCCGTCCTTTAATGAAGA    548
                     |||||.||||||||.||.||.||.|||||.||.|||.|.....|.|||||
RBAM_006730__    499 GACCGGTTTTTATTTAAGCTGCGCATGGGCTACCCGACTGCCGAGGAAGA    548

BSNT_01087___    549 GCTTGACGTCTTATCTCTTCAGGAAAAAAGCCATCCGATTGAGACGCTTG    598
                     ||||.|.||..|.|||.|.||||||....||.|||||.||||.||..|.|
RBAM_006730__    549 GCTTCAAGTTCTGTCTTTGCAGGAAGGGCGCAATCCGCTTGAAACAATCG    598

BSNT_01087___    599 AGCCGGTTATTGCAAAAGAAGACTTCAT----CTTTTTACAGAGGGAAGT    644
                     ||||.||.|||.|.||||||.|.||.||    |||    |||....||.|
RBAM_006730__    599 AGCCCGTCATTTCTAAAGAACAGTTTATCAGCCTT----CAGCAAAAACT    644

BSNT_01087___    645 GCAAAATGTCCGTGCTGATGACAGCATTAAGGAATATATCGTTGAAATTG    694
                     |.|..|.||.||.|..|||||..|.|||||.|..||||||||.|..|||.
RBAM_006730__    645 GGAGCAGGTGCGGGTGGATGATGGAATTAAAGCGTATATCGTCGGCATTA    694

BSNT_01087___    695 TGCAGAAAACGAGACAGCATCCTTCTGTTCAATTAGGCGTCAGTCCGCGC    744
                     ..|||.|.||..|.|.||||||.||.||.||..|.|||||.|||||||||
RBAM_006730__    695 CTCAGCATACCCGCCGGCATCCGTCCGTACATCTGGGCGTAAGTCCGCGC    744

BSNT_01087___    745 GGCTCAATCGCCCTCATGAAAGCGGCACAGGCATACGCGCTGCTGCATCA    794
                     ||.||||||.|..|.||||||||.||.|||||.|||||||||||.|||.|
RBAM_006730__    745 GGTTCAATCTCATTAATGAAAGCCGCGCAGGCGTACGCGCTGCTTCATGA    794

BSNT_01087___    795 TCGCGACTATGTCATACCGGATGATATTCAATATTTAGCTCCTTTCACGC    844
                     .|||||.||.|||||.||.|||||..|.||.|||||.|||||.|..||||
RBAM_006730__    795 CCGCGATTACGTCATTCCTGATGACGTCCAGTATTTGGCTCCGTATACGC    844

BSNT_01087___    845 TGCCGCACCGGATGATGCTTCATC-CTGAGGCAAAATTT---GAAGGGAT    890
                     ||||||||.|.||||| |.|.|.| |.|||||.||||||   ||.|.|| 
RBAM_006730__    845 TGCCGCACAGAATGAT-CCTGACCGCCGAGGCGAAATTTAACGATGTGA-    892

BSNT_01087___    891 TCAGGCAGAAGCGATCGTAAGGGAGATCATGTCAGCTGTGAAGGTGCCGG    940
                       .|.|.||||||||..||...||.||||||..|.|.|..||.|||||.|
RBAM_006730__    893 --CGCCGGAAGCGATTATAGAAGACATCATGCAAACGGAAAAAGTGCCCG    940

BSNT_01087___    941 TTCAAAGGTCGTCGGTCCGCTGA    963
                     ||||||||..|||||||||||.|
RBAM_006730__    941 TTCAAAGGATGTCGGTCCGCTAA    963


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_01087 and RBAM_006730

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
