Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01083 and RBAM_006710
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:45
# Commandline: needle
# -asequence pep-align/BSNT_01083___gabP.1.9828.seq
# -bsequence pep-align/RBAM_006710___gabP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01083___gabP-RBAM_006710___gabP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01083___gabP-RBAM_006710___gabP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01083___gabP
# 2: RBAM_006710___gabP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 469
# Identity: 392/469 (83.6%)
# Similarity: 424/469 (90.4%)
# Gaps: 8/469 ( 1.7%)
# Score: 2011.0
#
#
#=======================================
BSNT_01083___ 1 MNQSQSGLKKELKTRHMTMISIAGVIGAGLFVGSGSVIHSTGPGAVVSYA 50
|||..| |.|.||||||||||||||||||||||||||||||||||:||||
RBAM_006710__ 1 MNQPNS-LSKGLKTRHMTMISIAGVIGAGLFVGSGSVIHSTGPGAIVSYA 49
BSNT_01083___ 51 LAGLLVIFIMRMLGEMSAVNPTSGSFSQYAHDAIGPWAGFTIGWLYWFFW 100
|||||||||||||||||:||||||||||||||||||||||||||||||||
RBAM_006710__ 50 LAGLLVIFIMRMLGEMSSVNPTSGSFSQYAHDAIGPWAGFTIGWLYWFFW 99
BSNT_01083___ 101 VIVIAIEAIAGAGIIQYWFHDIPLWLTSLILTIVLTLTNVYSVKSFGEFE 150
|||||||||||||||||||..||||||||:||::|||||:||||||||||
RBAM_006710__ 100 VIVIAIEAIAGAGIIQYWFPGIPLWLTSLLLTVLLTLTNIYSVKSFGEFE 149
BSNT_01083___ 151 YWFSLIKVVTIIAFLIVGFAFIFGFAPGSEPVGFSNLTGKGGFFPEGISS 200
||.||:||.||:.|||.|||||||..|||:|||..||.|.|||||:|.||
RBAM_006710__ 150 YWLSLVKVATIVVFLIAGFAFIFGIVPGSKPVGLENLAGSGGFFPKGPSS 199
BSNT_01083___ 201 VLLGIVVVIFSFMGTEIVAIAAGETSNPIESVTKATRSVVWRIIVFYVGS 250
||||||||||||||:|||||||||||||:|||||||||||||||:|||||
RBAM_006710__ 200 VLLGIVVVIFSFMGSEIVAIAAGETSNPVESVTKATRSVVWRIIIFYVGS 249
BSNT_01083___ 251 IAIVVALLPWNSANILESPFVAVLEHIGVPAAAQIMNFIVLTAVLSCLNS 300
||:||.||||:|||||||||||||.|||||||||||||||||||||||||
RBAM_006710__ 250 IAVVVTLLPWDSANILESPFVAVLSHIGVPAAAQIMNFIVLTAVLSCLNS 299
BSNT_01083___ 301 GLYTTSRMLYSLAERNEAPRRFMKLSKKGVPVQAIVAGTFFSYIAVVMNY 350
|||||||||||||||||||||||||||:|||||||:||||||||||||||
RBAM_006710__ 300 GLYTTSRMLYSLAERNEAPRRFMKLSKRGVPVQAIIAGTFFSYIAVVMNY 349
BSNT_01083___ 351 FSPDTVFLFLVNSSGAIALLVYLVIAVSQLKMRKKLEKTNPEALKIKMWL 400
||||:|||||||||||||||||||||||.|:||||:|:||||:||||||.
RBAM_006710__ 350 FSPDSVFLFLVNSSGAIALLVYLVIAVSHLRMRKKIERTNPESLKIKMWF 399
BSNT_01083___ 401 FPFLTYLTILAICGILVSMAFIDSMRDELLLTGVITGIVLISYLVFRKRK 450
:|:||||||:|||.||:||.||.|||.|.||||.||.:||.||:..:|:|
RBAM_006710__ 400 YPYLTYLTIIAICAILLSMLFISSMRSEFLLTGFITLLVLASYVFRKKQK 449
BSNT_01083___ 451 VSEKAAANPVTQQQPDILP 469
..|.|:.:.|.|
RBAM_006710__ 450 PKESASESRVAQ------- 461
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