Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01077 and RBAM_006690

See DNA alignment / Visit BSNT_01077 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:45
# Commandline: needle
#    -asequence pep-align/BSNT_01077___ydjO.1.9828.seq
#    -bsequence pep-align/RBAM_006690___ydjO.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01077___ydjO-RBAM_006690___ydjO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01077___ydjO-RBAM_006690___ydjO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01077___ydjO
# 2: RBAM_006690___ydjO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 69
# Identity:      60/69 (87.0%)
# Similarity:    65/69 (94.2%)
# Gaps:           0/69 ( 0.0%)
# Score: 345.0
# 
#
#=======================================

BSNT_01077___      1 MSYYNKRNQEPLPKEDVSTWECTKEDCNGWTRKNFASSDTPLCPLCGSKM     50
                     |||||||||||||||||||||||||||.||:|||||.||||.||||||||
RBAM_006690__      1 MSYYNKRNQEPLPKEDVSTWECTKEDCIGWSRKNFAGSDTPTCPLCGSKM     50

BSNT_01077___     51 VDGIRSLVNLQNNSQTKTS     69
                     :||:|||||||||:||.:|
RBAM_006690__     51 IDGVRSLVNLQNNNQTASS     69


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