Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01077 and RBAM_006690
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:45
# Commandline: needle
# -asequence dna-align/BSNT_01077___ydjO.1.9828.seq
# -bsequence dna-align/RBAM_006690___ydjO.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01077___ydjO-RBAM_006690___ydjO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01077___ydjO-RBAM_006690___ydjO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01077___ydjO
# 2: RBAM_006690___ydjO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 212
# Identity: 176/212 (83.0%)
# Similarity: 176/212 (83.0%)
# Gaps: 4/212 ( 1.9%)
# Score: 731.0
#
#
#=======================================
BSNT_01077___ 1 ATGTCTTACTATAACAAACGAAATCAAGAACCGCTGCCAAAAGAAGATGT 50
|||||||||||.||||||||.|||||.|||||||||||.|||||||||||
RBAM_006690__ 1 ATGTCTTACTACAACAAACGTAATCAGGAACCGCTGCCTAAAGAAGATGT 50
BSNT_01077___ 51 GAGTACTTGGGAATGCACAAAAGAAGACTGTAATGGCTGGACCCGAAAAA 100
.|||||.|||||||||||||||||.|||||||..|||||||.|.||||.|
RBAM_006690__ 51 CAGTACGTGGGAATGCACAAAAGAGGACTGTATCGGCTGGAGCAGAAAGA 100
BSNT_01077___ 101 ACTTCGCCAGCAGTGATACGCC--ATTGTGCCCTTTATGCGGAAGTAAAA 148
|.||.|||.||||||||||.|| .|||..||||| |||||.|||||||
RBAM_006690__ 101 ATTTTGCCGGCAGTGATACCCCGACTTGCCCCCTT--TGCGGCAGTAAAA 148
BSNT_01077___ 149 TGGTCGACGGCATCCGTTCATTAGTGAATCTCCAAAACAACAGCCAAACG 198
||.||||||||.|||||||.||.||.||||||||||||||.|..||||||
RBAM_006690__ 149 TGATCGACGGCGTCCGTTCGTTGGTAAATCTCCAAAACAATAATCAAACG 198
BSNT_01077___ 199 AAAACAAGCTAG 210
..|.||||.|||
RBAM_006690__ 199 GCATCAAGTTAG 210
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