Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01076 and RBAM_006680

See DNA alignment / Visit BSNT_01076 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:45
# Commandline: needle
#    -asequence pep-align/BSNT_01076.1.9828.seq
#    -bsequence pep-align/RBAM_006680.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01076-RBAM_006680.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01076-RBAM_006680.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01076
# 2: RBAM_006680
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 52
# Identity:      22/52 (42.3%)
# Similarity:    36/52 (69.2%)
# Gaps:           0/52 ( 0.0%)
# Score: 127.0
# 
#
#=======================================

BSNT_01076         1 MISNQQQKDLKKRAAFKKLNVAMNSYVELLFLSMPLIHFFKWLGSLALHL     50
                     |.:::||.|||:.|..:|:|:|..|::|.|..::|::.|||||.|.|...
RBAM_006680        1 MKNDRQQNDLKEMAKRRKMNLAAQSFIETLHFAVPILRFFKWLASAAASF     50

BSNT_01076        51 IH     52
                     :|
RBAM_006680       51 VH     52


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