Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01076 and RBAM_006680
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:45
# Commandline: needle
# -asequence dna-align/BSNT_01076.1.9828.seq
# -bsequence dna-align/RBAM_006680.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01076-RBAM_006680.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01076-RBAM_006680.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01076
# 2: RBAM_006680
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 185
# Identity: 104/185 (56.2%)
# Similarity: 104/185 (56.2%)
# Gaps: 52/185 (28.1%)
# Score: 265.5
#
#
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BSNT_01076 1 GTGATCTCAAAC---CAGCAGCAAAAAGACTTGAAAAAAAGAGCTGCGTT 47
||...|||| |.||||||.||.||..||||..|||..||
RBAM_006680 1 ---ATGAAAAACGATCGGCAGCAGAACGATCTGAAGGAAATGGC------ 41
BSNT_01076 48 CAAAAA--GCTGAATGTTGCAATGAAC------------TCATATGTTGA 83
|||| ||.||| ||||||| ||||...|.||
RBAM_006680 42 --AAAACGGCGGAA------AATGAACCTTGCCGCACAGTCATTCATCGA 83
BSNT_01076 84 A---CTTCTGTTTTTGTCGATGCCGCTAATCCATTTTTTTAAATGGCTCG 130
| |||| .|||||.|| |.|||.|..|||.||||||.||||||||||
RBAM_006680 84 AACGCTTC--ATTTTGCCG-TTCCGATTCTCCGTTTTTTCAAATGGCTCG 130
BSNT_01076 131 GATCATTAGCCCTGCACCTCA------TCCATTAA 159
|.|.|||| |||.| || |.||||||
RBAM_006680 131 ---CCTCAGCC--GCAGC-CAGCTTTGTTCATTAA 159
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