Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01073 and RBAM_006670
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:45
# Commandline: needle
# -asequence pep-align/BSNT_01073___ydjN.1.9828.seq
# -bsequence pep-align/RBAM_006670___ydjN.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01073___ydjN-RBAM_006670___ydjN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01073___ydjN-RBAM_006670___ydjN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01073___ydjN
# 2: RBAM_006670___ydjN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 352
# Identity: 235/352 (66.8%)
# Similarity: 280/352 (79.5%)
# Gaps: 8/352 ( 2.3%)
# Score: 1174.0
#
#
#=======================================
BSNT_01073___ 1 MKKR--IILLLAVIIAAAA-AGVAFYVAKDKGHEKAADVSVNTESGDELL 47
|||: |.:|||.::|||. |.|.....|..|..|| |.:...|:||
RBAM_006670__ 1 MKKKRWIWMLLAAVLAAAVIAAVLLIKGKSDGGGKA----VVSGGHDKLL 46
BSNT_01073___ 48 VSITDTDLLTKYYENDKVIHEEKLTSYPAFALDQKQQVLYYTGNNEQNEM 97
|||||.||:|||||:.:|::||||::|||||||...||||:.|||:||||
RBAM_006670__ 47 VSITDKDLMTKYYEDGRVLYEEKLSAYPAFALDDAHQVLYFVGNNDQNEM 96
BSNT_01073___ 98 RLFKLDLKSNKKTVLYKGAESADSLFLSKDRSTIYFRLGKSDESNFRIAA 147
||:|||||:.||||||||..||||||||||.:.|||||||:||..||:|:
RBAM_006670__ 97 RLYKLDLKTKKKTVLYKGTASADSLFLSKDLTHIYFRLGKADEDIFRLAS 146
BSNT_01073___ 148 FDLKTKKYKNLYPAANDQDDTVSSFFYNQKNDSFALLHYSVEEDYKKTDE 197
||||||:|:||||||:::||:|||||||:..:.||||||||:|||:||||
RBAM_006670__ 147 FDLKTKRYENLYPAADEKDDSVSSFFYNRSQNDFALLHYSVKEDYQKTDE 196
BSNT_01073___ 198 ANEKGIDPEPTTIHFAEGRQHKFNELKSLNQFISDIAVSDDDKRILFTSY 247
|||||||||||.|.||.|......:|.:|.|||||:|||.|.|.::||||
RBAM_006670__ 197 ANEKGIDPEPTNIRFAAGAGEHLQDLTNLEQFISDVAVSPDGKNLVFTSY 246
BSNT_01073___ 248 TQKGTEQTASIQMLNADTKKYESIISNQKSFKLLIDAQPQFSKDGKNIYF 297
|||||||.|||:::|..|||.|:||||.|.|..||||||||||||..|||
RBAM_006670__ 247 TQKGTEQKASIRLMNVKTKKDETIISNGKDFAPLIDAQPQFSKDGSIIYF 296
BSNT_01073___ 298 LAEAKGAKKLKDETGREAKVRTIYSYSLENKTFKKVWENPNGIINSFSVI 347
:|||||||:|||||||.|||||||:|.|:.|..:|||||.||||||||||
RBAM_006670__ 297 MAEAKGAKRLKDETGRNAKVRTIYAYHLDTKKCEKVWENDNGIINSFSVI 346
BSNT_01073___ 348 N- 348
.
RBAM_006670__ 347 QS 348
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