Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03929 and RBAM_006640

See DNA alignment / Visit BSNT_03929 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:12
# Commandline: needle
#    -asequence pep-align/BSNT_03929___sigV.1.9828.seq
#    -bsequence pep-align/RBAM_006640___sigV.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03929___sigV-RBAM_006640___sigV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03929___sigV-RBAM_006640___sigV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03929___sigV
# 2: RBAM_006640___sigV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 166
# Identity:     139/166 (83.7%)
# Similarity:   157/166 (94.6%)
# Gaps:           1/166 ( 0.6%)
# Score: 725.0
# 
#
#=======================================

BSNT_03929___      1 MKKKQTTKALLVTCITDHKQDFYRLAFSYVKNQDDALDIVQESIKKALSS     50
                      .|.:|.||.||||||:.|:||||||:|||||:|||||||||||:|||:|
RBAM_006640__      1 -MKNETAKASLVTCITERKEDFYRLAYSYVKNKDDALDIVQESIQKALTS     49

BSNT_03929___     51 VETVRNPETIKSWFYKILVRTAIDFLRKQKKIRVMDDETIEFLSKGKEDH    100
                     ||:|:||:.||||||||||||||||||||||::|||||||||||:|||||
RBAM_006640__     50 VESVKNPDVIKSWFYKILVRTAIDFLRKQKKLKVMDDETIEFLSRGKEDH     99

BSNT_03929___    101 YKDTDLYEALDELPYRYKTIIILRFFEDLKLEEIAEITGENTNTVKTRLY    150
                     ||||||:||||:||::|||||||||||||||||||:|||||.||||||||
RBAM_006640__    100 YKDTDLHEALDDLPHQYKTIIILRFFEDLKLEEIADITGENINTVKTRLY    149

BSNT_03929___    151 RALKLMRIQLTKEDLS    166
                     |.||||||||||||||
RBAM_006640__    150 RGLKLMRIQLTKEDLS    165


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