Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03930 and RBAM_006630

See DNA alignment / Visit BSNT_03930 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:12
# Commandline: needle
#    -asequence pep-align/BSNT_03930___yrhM.1.9828.seq
#    -bsequence pep-align/RBAM_006630___yrhM.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03930___yrhM-RBAM_006630___yrhM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03930___yrhM-RBAM_006630___yrhM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03930___yrhM
# 2: RBAM_006630___yrhM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 286
# Identity:     234/286 (81.8%)
# Similarity:   270/286 (94.4%)
# Gaps:           1/286 ( 0.3%)
# Score: 1214.0
# 
#
#=======================================

BSNT_03930___      1 MDKRLQQLREEYKNVPIPKELDIIVEKALQQEPKKKRIVMWPTSAAIAAA     50
                     |:|||:|||||||:||||||||.||||||||:||||||||||||||:|||
RBAM_006630__      1 MEKRLEQLREEYKSVPIPKELDSIVEKALQQKPKKKRIVMWPTSAAVAAA     50

BSNT_03930___     51 ILFTALVNINPDAAQAMSRIPVIGKIVKAITFIEIKEEKDQSSIDVKTPA    100
                     :||||:||||||||||||:||||||:|:||||.|:||||:||||||||||
RBAM_006630__     51 VLFTAVVNINPDAAQAMSKIPVIGKVVQAITFTEMKEEKNQSSIDVKTPA    100

BSNT_03930___    101 LSGLSNKELENSINQKYLKESQQLYKEFIQSTSKNKKGHLSIYSDYETVT    150
                     |||||:.:||:|||:.|:|||::||:||:::|||:|||||||||||||||
RBAM_006630__    101 LSGLSDHKLEDSINRHYMKESKELYQEFMKATSKSKKGHLSIYSDYETVT    150

BSNT_03930___    151 DTPDLLSIRRNIEKTQASSYTQSRYITIDKKNDILLTLKSLFKDERYIKV    200
                     ||.||:||||:|||||||||||||||||||||:.:|||||||||:|||||
RBAM_006630__    151 DTADLISIRRDIEKTQASSYTQSRYITIDKKNEAVLTLKSLFKDDRYIKV    200

BSNT_03930___    201 ISQNIREQMKQQMKEDPNKIYWLTDED-AEPFKTILPDQTFYITEDHKLV    249
                     ||:||:||||:|||||||||||:.|:| .||||.|..||.||||:.||||
RBAM_006630__    201 ISENIKEQMKKQMKEDPNKIYWVEDDDMTEPFKAIRADQNFYITDKHKLV    250

BSNT_03930___    250 ISFDEYEVAPGYMGVTEFTIPTSVISNLLVGERYIR    285
                     |||||||.||||||||||||||||||.||||:||||
RBAM_006630__    251 ISFDEYEAAPGYMGVTEFTIPTSVISKLLVGDRYIR    286


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