Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01064 and RBAM_006600

See DNA alignment / Visit BSNT_01064 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:44
# Commandline: needle
#    -asequence pep-align/BSNT_01064___ydjH.1.9828.seq
#    -bsequence pep-align/RBAM_006600___ydjH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01064___ydjH-RBAM_006600___ydjH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01064___ydjH-RBAM_006600___ydjH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01064___ydjH
# 2: RBAM_006600___ydjH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 254
# Identity:     154/254 (60.6%)
# Similarity:   195/254 (76.8%)
# Gaps:           1/254 ( 0.4%)
# Score: 792.0
# 
#
#=======================================

BSNT_01064___      1 MRGFLGKAIFVVLAVFIMVPLLGIEAARASESQQHVYDRAHLLSKAEIGK     50
                     |:..:.||......:|:|:......:|.|:|.:|:|||.||||:|.|..|
RBAM_006600__      1 MKVSIKKACLFCFVLFLMLSFGLHTSASAAEQKQYVYDNAHLLTKDETKK     50

BSNT_01064___     51 LESLSAELGAKRDTNFIIITTKSTNGEDIADYTGDFYDRYGKGSTAILTI    100
                     ||.|:.:|||||.|:|||:|...|.|:||..|.|||||.:..||||||||
RBAM_006600__     51 LEELAGKLGAKRHTDFIILTANGTGGKDIEQYAGDFYDSHFSGSTAILTI    100

BSNT_01064___    101 DMTNREVFIAGFKKAEQYLDNSRLNSIRNTISSDLSNENYFEAFETYIQL    150
                     ||..|||||:|:||||.||:|||||:||||||||:|..:|.:||:|||:|
RBAM_006600__    101 DMKKREVFISGYKKAETYLNNSRLNTIRNTISSDISAGHYEKAFQTYIKL    150

BSNT_01064___    151 SYKDMGIKPGVNPDNIFFTWWFQLIAAIAVGGIAVSIMLYHAGGKVTVNG    200
                     :|||||..|....||:..|||||||.|.|..||||::|:|::||||||.|
RBAM_006600__    151 AYKDMGKSPDDKSDNLLLTWWFQLIIAAAAAGIAVTVMVYNSGGKVTVTG    200

BSNT_01064___    201 NTYMDQRTSDVIDQYDTYIRTTVTRERKPSDKDSGSDGGVTKGGTSYSGS    250
                     :||||..||:|:.|:||||||.||||:|| |||:.:|||||:||||||||
RBAM_006600__    201 STYMDHDTSEVLSQHDTYIRTDVTREKKP-DKDNDNDGGVTRGGTSYSGS    249

BSNT_01064___    251 RGSF    254
                     :|||
RBAM_006600__    250 KGSF    253


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