Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01061 and RBAM_006580
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:44
# Commandline: needle
# -asequence pep-align/BSNT_01061.1.9828.seq
# -bsequence pep-align/RBAM_006580___pspA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01061-RBAM_006580___pspA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01061-RBAM_006580___pspA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01061
# 2: RBAM_006580___pspA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 229
# Identity: 80/229 (34.9%)
# Similarity: 95/229 (41.5%)
# Gaps: 123/229 (53.7%)
# Score: 404.0
#
#
#=======================================
BSNT_01061 0 -------------------------------------------------- 0
RBAM_006580__ 1 MSILGRFKDIMSSNINALLDKAENPEKMVDQYLRNLNSDLGKVKAETASV 50
BSNT_01061 0 -------------------------------------------------- 0
RBAM_006580__ 51 MAEEQRAKRTLTECQADAEKMESYAMKALQAGNEADARTFLERKAAVESR 100
BSNT_01061 1 --------------------MHDKLVSDIGELEARKNMIKAKWAVAKTQE 30
||||||:||||||:|:|.|||||:||||||
RBAM_006580__ 101 LTELQTAYQLASSNASQMRKMHDKLVADIGELESRRNAIKAKWSVAKTQE 150
BSNT_01061 31 RMNKLDASVSSTSQSMSAFGRMEDKVNKALDQANAMAELNSAPQDDMADL 80
|||||.:|||:..|||:||||||||||:|||.||||||||::|:||:.||
RBAM_006580__ 151 RMNKLGSSVSNAGQSMTAFGRMEDKVNQALDHANAMAELNASPKDDIDDL 200
BSNT_01061 81 TAKYDTGGSSQIDDELAALKAKMMLDK-- 107
|||||:..|| :||||||||.||:..|
RBAM_006580__ 201 TAKYDSNQSS-VDDELAALKQKMLFSKDQ 228
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