Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02045 and RBAM_006570

See DNA alignment / Visit BSNT_02045 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:45
# Commandline: needle
#    -asequence pep-align/BSNT_02045___yjdJ.1.9828.seq
#    -bsequence pep-align/RBAM_006570___yjdJ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02045___yjdJ-RBAM_006570___yjdJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02045___yjdJ-RBAM_006570___yjdJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02045___yjdJ
# 2: RBAM_006570___yjdJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 110
# Identity:      65/110 (59.1%)
# Similarity:    84/110 (76.4%)
# Gaps:           6/110 ( 5.5%)
# Score: 337.0
# 
#
#=======================================

BSNT_02045___      1 MKGIFLVVQLGFSIMVFLFLAAVNWYQGSELVSDRFDWNYTAKLSKLLNG     50
                     ||.:||:||..||:..||.|||||||||||||||.||||.|||.||||||
RBAM_006570__      1 MKHVFLIVQCAFSVFCFLCLAAVNWYQGSELVSDSFDWNDTAKFSKLLNG     50

BSNT_02045___     51 IDAVSSPKQISQLDFFIYSAKYYPVMSALMIISFLYVLAALFLLIYSVKC    100
                     .|.::||:||||||||:|:||:||::|.|||..|:|.|.:|:|::.:.:.
RBAM_006570__     51 TDTITSPEQISQLDFFVYAAKHYPLVSGLMIGLFIYFLFSLYLVVKNFRR    100

BSNT_02045___    101 NK-QEIHLDC    109
                     :| .|     
RBAM_006570__    101 HKWAE-----    105


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