Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01054 and RBAM_006530

See DNA alignment / Visit BSNT_01054 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:43
# Commandline: needle
#    -asequence pep-align/BSNT_01054___gutR.1.9828.seq
#    -bsequence pep-align/RBAM_006530___gutR.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01054___gutR-RBAM_006530___gutR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01054___gutR-RBAM_006530___gutR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01054___gutR
# 2: RBAM_006530___gutR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 833
# Identity:     679/833 (81.5%)
# Similarity:   739/833 (88.7%)
# Gaps:           8/833 ( 1.0%)
# Score: 3583.0
# 
#
#=======================================

BSNT_01054___      1 MAELENRKQFAQLLAPGVKTLKLHPDYKVRRKKNEKTGQSYIDKIALQLG     50
                     |||||||.|||:||||.||:||.||||||||||||||||||||:|||:||
RBAM_006530__      1 MAELENRTQFAELLAPAVKSLKHHPDYKVRRKKNEKTGQSYIDQIALRLG     50

BSNT_01054___     51 VSPNTIKSWIGQMGANYIPGRIEDGKLFGMIWIILEKTDFDIEWLTNLLE    100
                     ||.|||||||||||||||||||:|||||||||||:||||.|.||||.|||
RBAM_006530__     51 VSSNTIKSWIGQMGANYIPGRIDDGKLFGMIWIIIEKTDMDPEWLTGLLE    100

BSNT_01054___    101 TTTIPVIKPALPVWAASCLKKAKILRKDGLFGAPSEDEIENVVKRLFHDR    150
                     .|||||||||||||.|||||||||||||..|||||:|::|..||||||||
RBAM_006530__    101 NTTIPVIKPALPVWTASCLKKAKILRKDRSFGAPSDDDVEKAVKRLFHDR    150

BSNT_01054___    151 PGHETNALTEQPITHNLPSRWSGRFIGRSFDMEAIRQWMLSPSPVCLITG    200
                     |.:||||||...:|||||||.:|.||||:||||||||||||.||||||||
RBAM_006530__    151 PSYETNALTRNSVTHNLPSRRTGNFIGRNFDMEAIRQWMLSQSPVCLITG    200

BSNT_01054___    201 WAGMGKTTVALEAAYSCVDDTSDWLAFNSIIWVSADWKGLSFSDFLNTIA    250
                     ||||||||:||||||.|...:.||.|||||||:|||||||||||||||||
RBAM_006530__    201 WAGMGKTTIALEAAYLCAGGSPDWPAFNSIIWISADWKGLSFSDFLNTIA    250

BSNT_01054___    251 YQLGRTEQIDKSINEKRFVVRNALANYTREKPILLIVDSIDTAERDIHEF    300
                     |||||.|||||||||||||||||||.::.|.|:|||||.||||||:||||
RBAM_006530__    251 YQLGRAEQIDKSINEKRFVVRNALAAHSNETPVLLIVDGIDTAERNIHEF    300

BSNT_01054___    301 ITSLPQGVKVLLTARENVKQTYRESFGEMTAIQLSGLEQTDALDFFQQEV    350
                     |..||||||||||||||||||||:..||:.||||.||||||||:||.|||
RBAM_006530__    301 IIGLPQGVKVLLTARENVKQTYRDGLGELAAIQLGGLEQTDALEFFHQEV    350

BSNT_01054___    351 HRCLQTCNIQNKREKLEQLLHLSSDLKNEFISATAGNPKAMALSIAYMSD    400
                     ||||||||:..|||||||||.||.||||||:||.||||||||||||||||
RBAM_006530__    351 HRCLQTCNLPQKREKLEQLLELSPDLKNEFVSAAAGNPKAMALSIAYMSD    400

BSNT_01054___    401 DDIPAQQLIHELGKAGYSLLELFEFLFGRTWDRCNEDTRKLWQTLCFFSK    450
                     |||||.|||.||.:||||||||||.|||||||||:|||||||||||||:|
RBAM_006530__    401 DDIPAPQLIQELKQAGYSLLELFEVLFGRTWDRCHEDTRKLWQTLCFFAK    450

BSNT_01054___    451 PPDEKSLAAAAGLDARRFHYAMEQMRSYALIQPERSQGRTQYLAHQTVVA    500
                     ||||||||.||||||||||||:||||||||||||||.|..||.|||||||
RBAM_006530__    451 PPDEKSLAQAAGLDARRFHYAIEQMRSYALIQPERSAGSIQYAAHQTVVA    500

BSNT_01054___    501 YGEQHLSEQHEYEKEARNRWAHYYIDYAETHLKREQPNSIYWSYLLGRNL    550
                     ||||||||.||..||||:|||||||||||||||||:|||:||||||||||
RBAM_006530__    501 YGEQHLSENHELAKEARSRWAHYYIDYAETHLKRERPNSVYWSYLLGRNL    550

BSNT_01054___    551 DQMKQEWPNILKVIQWASETDQKEILIELITRISHFLSRINLPLRIEYGR    600
                     :|||:|||||||||:|:.||.|.:|||:||.||||||||||||||||||.
RBAM_006530__    551 EQMKKEWPNILKVIEWSGETGQHDILIKLIIRISHFLSRINLPLRIEYGL    600

BSNT_01054___    601 KAADAAHHLGQHTREAYFRIDTSGWALMEVNDLDGALQQIEAGLKILEQS    650
                     ||||||...|:|||||||||||:|||||||||.||||:||||||||||||
RBAM_006530__    601 KAADAARQSGEHTREAYFRIDTAGWALMEVNDSDGALRQIEAGLKILEQS    650

BSNT_01054___    651 DAHDAHDLKVWGHALKARLFLKAGQQEKAKTILNAIENQPISPTIQHRVL    700
                     .|.|..||||||.||::||.||.|:.|||..:|:.|::||:||.|:||||
RBAM_006530__    651 GAPDHDDLKVWGTALQSRLLLKIGEPEKAAAMLDGIKDQPVSPIIRHRVL    700

BSNT_01054___    701 LVRGDLSFARGHHEEAIQLYEAANEISSTYGGEKTIEAYFNLGVAYVKCG    750
                     ||||||||||.|:||||.||||||..|:.||||||||||||||:|||||.
RBAM_006530__    701 LVRGDLSFARSHYEEAITLYEAANTTSAAYGGEKTIEAYFNLGMAYVKCD    750

BSNT_01054___    751 QFEKAEEAFEQMLYDKHNANQVELIYYDYGMAQLLYRKGEKTKASEANQR    800
                     |.||||:||||||||||||||||||||.||||||||||||||||.|:||:
RBAM_006530__    751 QLEKAEKAFEQMLYDKHNANQVELIYYYYGMAQLLYRKGEKTKAMESNQK    800

BSNT_01054___    801 AIRLIDSWEPAIGIRGEVEQLDMVIKGNREITL    833
                     |:||||||||.|||||||||:|::|        
RBAM_006530__    801 AMRLIDSWEPGIGIRGEVEQMDILI--------    825


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_01054 and RBAM_006530

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
