Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01048 and RBAM_006480

See DNA alignment / Visit BSNT_01048 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:43
# Commandline: needle
#    -asequence pep-align/BSNT_01048___groEL.1.9828.seq
#    -bsequence pep-align/RBAM_006480___groEL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01048___groEL-RBAM_006480___groEL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01048___groEL-RBAM_006480___groEL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01048___groEL
# 2: RBAM_006480___groEL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 544
# Identity:     532/544 (97.8%)
# Similarity:   539/544 (99.1%)
# Gaps:           1/544 ( 0.2%)
# Score: 2596.0
# 
#
#=======================================

BSNT_01048___      1 MAKEIKFSEEARRAMLRGVDALADAVKVTLGPKGRNVVLEKKFGSPLITN     50
                     |||:||||||||||||||||||||||||||||||||||||||||||||||
RBAM_006480__      1 MAKDIKFSEEARRAMLRGVDALADAVKVTLGPKGRNVVLEKKFGSPLITN     50

BSNT_01048___     51 DGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIR    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_006480__     51 DGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIR    100

BSNT_01048___    101 EGLKNVTAGANPVGVRKGMEQAVAVAIENLKEISKPIEGKESIAQVAAIS    150
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
RBAM_006480__    101 EGLKNVTAGANPVGVRKGMEQAVTVAIENLKEISKPIEGKESIAQVAAIS    150

BSNT_01048___    151 AADEEVGSLIAEAMERVGNDGVITIEESKGFTTELEVVEGMQFDRGYASP    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_006480__    151 AADEEVGSLIAEAMERVGNDGVITIEESKGFTTELEVVEGMQFDRGYASP    200

BSNT_01048___    201 YMVTDSDKMEAVLDNPYILITDKKITNIQEILPVLEQVVQQGKPLLLIAE    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_006480__    201 YMVTDSDKMEAVLDNPYILITDKKITNIQEILPVLEQVVQQGKPLLLIAE    250

BSNT_01048___    251 DVEGEALATLVVNKLRGTFNAVAVKAPGFGDRRKAMLEDIAVLTGGEVIT    300
                     ||||||||||||||||||||||||||||||||||||||||:|||||||||
RBAM_006480__    251 DVEGEALATLVVNKLRGTFNAVAVKAPGFGDRRKAMLEDISVLTGGEVIT    300

BSNT_01048___    301 EDLGLDLKSTQIAQLGRASKVVVTKENTTIVEGAGETDKISARVTQIRAQ    350
                     ||||||||||:|.||||||||||||||||||||||:|:||:|||.|||||
RBAM_006480__    301 EDLGLDLKSTEIGQLGRASKVVVTKENTTIVEGAGDTEKIAARVNQIRAQ    350

BSNT_01048___    351 VEETTSEFDREKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNS    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_006480__    351 VEETTSEFDREKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNS    400

BSNT_01048___    401 TRAAVEEGIVSGGGTALVNVYNKVAAVEAEGDAQTGINIVLRALEEPIRQ    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_006480__    401 TRAAVEEGIVSGGGTALVNVYNKVAAVEAEGDAQTGINIVLRALEEPIRQ    450

BSNT_01048___    451 IAHNAGLEGSVIVERLKNEEIGVGFNAATGEWVNMIEKGIVDPTKVTRSA    500
                     |||||||||||||||||||:||||||||||||||||||||||||||||||
RBAM_006480__    451 IAHNAGLEGSVIVERLKNEKIGVGFNAATGEWVNMIEKGIVDPTKVTRSA    500

BSNT_01048___    501 LQNAASVAAMFLTTEAVVADKPEENAGG-GMPDMGGMGGMGGMM    543
                     ||||||||||.||||||||||||||||| |||||||||||||||
RBAM_006480__    501 LQNAASVAAMLLTTEAVVADKPEENAGGAGMPDMGGMGGMGGMM    544


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