Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01048 and RBAM_006480
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:43
# Commandline: needle
# -asequence dna-align/BSNT_01048___groEL.1.9828.seq
# -bsequence dna-align/RBAM_006480___groEL.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01048___groEL-RBAM_006480___groEL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01048___groEL-RBAM_006480___groEL.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01048___groEL
# 2: RBAM_006480___groEL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1636
# Identity: 1532/1636 (93.6%)
# Similarity: 1532/1636 (93.6%)
# Gaps: 5/1636 ( 0.3%)
# Score: 7233.0
#
#
#=======================================
BSNT_01048___ 1 ATGGCAAAAGAAATTAAGTTTAGTGAAGAAGCTCGCCGCGCAATGCTTCG 50
|||||||||||.||||||||||||||||||||.||||||||.||||||||
RBAM_006480__ 1 ATGGCAAAAGATATTAAGTTTAGTGAAGAAGCACGCCGCGCTATGCTTCG 50
BSNT_01048___ 51 CGGTGTCGATGCACTTGCTGATGCTGTTAAAGTAACTTTAGGACCAAAAG 100
||||||||||||.||||||||.|||||.||||||||||||||.|||||||
RBAM_006480__ 51 CGGTGTCGATGCGCTTGCTGACGCTGTAAAAGTAACTTTAGGGCCAAAAG 100
BSNT_01048___ 101 GACGCAACGTGGTTCTAGAGAAAAAATTCGGTTCTCCGTTAATCACAAAT 150
||||||||||||||||.|||||||||||||||||||||||||||||||||
RBAM_006480__ 101 GACGCAACGTGGTTCTGGAGAAAAAATTCGGTTCTCCGTTAATCACAAAT 150
BSNT_01048___ 151 GACGGTGTAACAATCGCTAAAGAAATCGAGCTTGAAGATGCGTTTGAAAA 200
||||||||.||||||||.||||||||.||.||||||||||||||||||||
RBAM_006480__ 151 GACGGTGTGACAATCGCAAAAGAAATTGAACTTGAAGATGCGTTTGAAAA 200
BSNT_01048___ 201 CATGGGTGCGAAGCTTGTAGCTGAAGTAGCCAGCAAAACAAACGACGTTG 250
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_006480__ 201 CATGGGTGCGAAGCTTGTAGCTGAAGTAGCCAGCAAAACAAACGACGTTG 250
BSNT_01048___ 251 CCGGTGACGGTACAACAACTGCGACAGTTCTTGCGCAAGCAATGATCCGT 300
|||||||||||||.||.||||||||.||.||||||||.||.||||||||.
RBAM_006480__ 251 CCGGTGACGGTACGACGACTGCGACTGTACTTGCGCAGGCTATGATCCGC 300
BSNT_01048___ 301 GAAGGCCTTAAAAACGTAACAGCGGGCGCTAACCCTGTAGGCGTGCGTAA 350
||||||.|.|||||||||||.|||||.|||||||||||.|||||||||||
RBAM_006480__ 301 GAAGGCTTGAAAAACGTAACTGCGGGGGCTAACCCTGTCGGCGTGCGTAA 350
BSNT_01048___ 351 AGGGATGGAACAAGCTGTAGCGGTTGCGATCGAAAACTTAAAAGAAATTT 400
|||.|||||||||||.||..|.||.||.||||||||||||||||||||||
RBAM_006480__ 351 AGGTATGGAACAAGCCGTGACTGTAGCAATCGAAAACTTAAAAGAAATTT 400
BSNT_01048___ 401 CTAAGCCAATCGAAGGCAAAGAGTCTATCGCTCAGGTTGCTGCGATCTCT 450
|||||||.||||||||||||||||||||||||||||||||||||||||||
RBAM_006480__ 401 CTAAGCCGATCGAAGGCAAAGAGTCTATCGCTCAGGTTGCTGCGATCTCT 450
BSNT_01048___ 451 GCTGCTGATGAGGAAGTCGGAAGCCTTATCGCTGAAGCAATGGAGCGCGT 500
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_006480__ 451 GCTGCTGATGAGGAAGTCGGAAGCCTTATCGCTGAAGCAATGGAGCGCGT 500
BSNT_01048___ 501 AGGAAACGACGGCGTTATCACAATCGAAGAGTCTAAAGGCTTCACAACTG 550
|||||||||||||||.|||||||||||||||||||||||.||||||||||
RBAM_006480__ 501 AGGAAACGACGGCGTCATCACAATCGAAGAGTCTAAAGGATTCACAACTG 550
BSNT_01048___ 551 AGCTTGAAGTTGTTGAAGGTATGCAATTCGACCGCGGATATGCGTCTCCT 600
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_006480__ 551 AGCTTGAAGTTGTTGAAGGTATGCAATTCGACCGCGGATATGCGTCTCCT 600
BSNT_01048___ 601 TACATGGTAACTGACTCTGATAAGATGGAAGCGGTTCTTGACAATCCTTA 650
||||||||.|||||||||||||||||||||||||||||||||||||||||
RBAM_006480__ 601 TACATGGTGACTGACTCTGATAAGATGGAAGCGGTTCTTGACAATCCTTA 650
BSNT_01048___ 651 CATCTTAATCACAGACAAAAAAATCACAAACATTCAAGAAATCCTTCCTG 700
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_006480__ 651 CATCTTAATCACAGACAAAAAAATCACAAACATTCAAGAAATCCTTCCTG 700
BSNT_01048___ 701 TGCTTGAGCAGGTTGTTCAGCAAGGCAAACCATTGCTTCTGATCGCTGAG 750
||||||||||.|||||.||||||||||||||||||||||||||||||||.
RBAM_006480__ 701 TGCTTGAGCAAGTTGTACAGCAAGGCAAACCATTGCTTCTGATCGCTGAA 750
BSNT_01048___ 751 GATGTTGAAGGCGAAGCACTTGCAACACTTGTTGTGAACAAACTTCGCGG 800
|||||||||||.|||||.|||||.|||||.|||||.||||||||||||||
RBAM_006480__ 751 GATGTTGAAGGTGAAGCGCTTGCTACACTCGTTGTCAACAAACTTCGCGG 800
BSNT_01048___ 801 CACATTCAACGCAGTTGCTGTTAAAGCTCCTGGCTTCGGTGACCGCCGTA 850
||||||||||||.|||||.|||||||||||||||||||||||||||||||
RBAM_006480__ 801 CACATTCAACGCTGTTGCCGTTAAAGCTCCTGGCTTCGGTGACCGCCGTA 850
BSNT_01048___ 851 AAGCAATGCTTGAAGACATCGCTGTCCTTACTGGCGGAGAAGTCATCACA 900
||||||||||||||||||||.||||.|||||.|||||||||||.||||||
RBAM_006480__ 851 AAGCAATGCTTGAAGACATCTCTGTTCTTACAGGCGGAGAAGTAATCACA 900
BSNT_01048___ 901 GAAGATCTT-GGCCTTGACCTGAAATCTACTCAAATCGCTCAATTGGGAC 949
||||| ||| |||||||||||||||||||||.||||||..||||||||||
RBAM_006480__ 901 GAAGA-CTTAGGCCTTGACCTGAAATCTACTGAAATCGGACAATTGGGAC 949
BSNT_01048___ 950 GCGCTTCTAAAGTTGTCGTTACTAAAGAAAACACAACAATCGTTGAAGGC 999
||||||||||||||||.||.||.||||||||||||||||||||.||||||
RBAM_006480__ 950 GCGCTTCTAAAGTTGTGGTAACGAAAGAAAACACAACAATCGTAGAAGGC 999
BSNT_01048___ 1000 GCTGGCGAAACAGACAAAATTTCTGCCCGCGTGACTCAAATCCGCGCTCA 1049
||.|||||.||.||.|||||..||||.|||||.|..||||||||||||||
RBAM_006480__ 1000 GCCGGCGACACTGAAAAAATCGCTGCACGCGTCAACCAAATCCGCGCTCA 1049
BSNT_01048___ 1050 AGTGGAAGAAACAACTTCTGAATTCGACAGAGAAAAATTACAAGAGCGTC 1099
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_006480__ 1050 AGTGGAAGAAACAACTTCTGAATTCGACAGAGAAAAATTACAAGAGCGTC 1099
BSNT_01048___ 1100 TTGCTAAACTTGCTGGCGGCGTAGCTGTCATCAAAGTCGGCGCTGCGACT 1149
||||.||||||||.||||||||||||||||||||||||||||||||||||
RBAM_006480__ 1100 TTGCGAAACTTGCCGGCGGCGTAGCTGTCATCAAAGTCGGCGCTGCGACT 1149
BSNT_01048___ 1150 GAAACTGAACTGAAAGAGCGTAAACTTCGCATCGAAGACGCCCTGAACTC 1199
||||||||.|||||||||||.|||||||||||||||||||||||.|||||
RBAM_006480__ 1150 GAAACTGAGCTGAAAGAGCGCAAACTTCGCATCGAAGACGCCCTCAACTC 1199
BSNT_01048___ 1200 AACTCGCGCAGCTGTTGAAGAAGGCATCGTATCCGGTGGTGGTACAGCGC 1249
||||||||||||||||||||||||.|||||||||||.|||||||||||||
RBAM_006480__ 1200 AACTCGCGCAGCTGTTGAAGAAGGTATCGTATCCGGCGGTGGTACAGCGC 1249
BSNT_01048___ 1250 TTGTAAACGTATATAATAAAGTCGCTGCAGTTGAAGCTGAAGGCGATGCT 1299
||||.||||||||.||.||||||||||||||.|||||||||||||||||.
RBAM_006480__ 1250 TTGTCAACGTATACAACAAAGTCGCTGCAGTGGAAGCTGAAGGCGATGCG 1299
BSNT_01048___ 1300 CAAACAGGTATCAACATCGTGCTTCGCGCGCTTGAAGAGCCAATCCGTCA 1349
|||||||||||||||||||||||||||||||||||||||||.||||||||
RBAM_006480__ 1300 CAAACAGGTATCAACATCGTGCTTCGCGCGCTTGAAGAGCCGATCCGTCA 1349
BSNT_01048___ 1350 AATCGCACACAATGCTGGTCTTGAAGGATCTGTCATCGTTGAACGCCTCA 1399
||||||.||||||||.||||||||||||||||||||||||||.|||||.|
RBAM_006480__ 1350 AATCGCGCACAATGCAGGTCTTGAAGGATCTGTCATCGTTGAGCGCCTGA 1399
BSNT_01048___ 1400 AAAACGAAGAAATCGGCGTAGGCTTCAACGCTGCAACTGGCGAATGGGTA 1449
||||||||.|||||||||||||||||||||||||||||||||||||||||
RBAM_006480__ 1400 AAAACGAAAAAATCGGCGTAGGCTTCAACGCTGCAACTGGCGAATGGGTA 1449
BSNT_01048___ 1450 AACATGATCGAAAAAGGTATCGTTGACCCAACGAAAGTTACACGCTCAGC 1499
|||||||||||||||||||||||||||||.||.|||||||||||.|||||
RBAM_006480__ 1450 AACATGATCGAAAAAGGTATCGTTGACCCGACAAAAGTTACACGTTCAGC 1499
BSNT_01048___ 1500 TCTTCAAAACGCTGCGTCTGTAGCTGCAATGTTCTTAACAACTGAAGCCG 1549
.||.||||||||.||.||||||||.||||||.||||||||||||||||.|
RBAM_006480__ 1500 CCTGCAAAACGCAGCTTCTGTAGCAGCAATGCTCTTAACAACTGAAGCGG 1549
BSNT_01048___ 1550 TTGTCGCTGACAAGCCAGAAGAAAACGCTGGCGGC---GGAATGCCTGAT 1596
|||||||||||||.||.|||||||||||.|||||| |||||||||||.
RBAM_006480__ 1550 TTGTCGCTGACAAACCGGAAGAAAACGCCGGCGGCGCAGGAATGCCTGAC 1599
BSNT_01048___ 1597 ATGGGCGGCATGGGCGGTATGGGCGGAATGATGTAA 1632
|||||||||||||||||||||||.||||||||||||
RBAM_006480__ 1600 ATGGGCGGCATGGGCGGTATGGGTGGAATGATGTAA 1635
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